Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2959 |
Symbol | |
ID | 3962240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3266643 |
End bp | 3267785 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917778 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_524201 |
Protein GI | 89901730 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.528569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTT TCTGGTTGTT GTTTTCGCAA GCGGTCACCG TGGTGCTGGC AGCCTATTTT GTGGTTGGCA CACTCAAGCC CGATTGGCTG GCAAGCCGGT CAGCGAGTTC TAGCACCGTG GCCTTGACGG AGGCGCCTGC CAGCAGTCCG GGCGTGGTGC CGCCAGGCAG TTTCAGACTG GCGGCGCAAA AATCTTCTGC GGCGGTGGTC AGCATCAACA CCAGCAAGGC AGCCCGGAAT GACCCGCGCA ACCAGGACCC GTGGTTCAGG TTCTTCTTTG GCGAGCAGGG CAATGAGCCG CAGGTGGGTC TGGGCAGTGG CGTGATTGTG AGTGCCAGTG GCTATATCCT GACCAACAAC CATGTGGTCG AGAGTGCCGA TGAAATTGAG GTCGTCCTGA ACGACAGTCG CCGTGCGCGG GCCAAAGTGG TTGGCACCGA CCCGGAGACC GACCTGGCGG TCTTGAAGAT AGAACTCGAC CGCCTGCCCG CGATTGTGCT GGGCAACTCC GATGCGCTTC AGGTGGGAGA CCAGGTGCTG GCGATTGGCA ACCCTTTTGG TGTTGGGCAA ACCGTCACCA GCGGGATCAT CAGTGCGCTC GGGCGCAATC AGTTGGGTAT CAACACCTTT GAGAACTTCA TCCAGACCGA TGCTGCCATC AACCCCGGCA ACTCGGGGGG TGCGCTGGTG GATACCAGCG GCAATCTGCT GGGCATCAAC ACGGCGATCT ATTCGCGCTC GGGCGGCAGC ATGGGCATTG GTTTCGCCAT ACCCGTGGCG ACCGCCAAAC TGGTGCTGGA AGGCATTGTG AAGGATGGGC AGGTCACACG CGGCTGGATT GGCGTGGAGC CCAACGATTT GTCGCCCGAA CTGGCTGAAA CCTTTGGCGT CAAGGCCAAA GAAGGGGTGA TCATCACCGG GGTGCTGCAA GATGGACCAG CGGCGCGAGC CGGCATCAAG CCCGGTGATG TGATTACCCA GGTGGCGGGC AAGCCGGTCG GCAATGTGGC AGATTTACTG AGCAGTGTTG CTGCCTTGAA ACCCGGGACA GCGTCCAAAT TCAGCGTGCT GCGCCGTGAC AGCCAGGTTG AGTTGGCCGT GACGCCCAGT GTGCGGCCCA AACAGCGCCG GCCAGCGCCC TAA
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Protein sequence | MKRFWLLFSQ AVTVVLAAYF VVGTLKPDWL ASRSASSSTV ALTEAPASSP GVVPPGSFRL AAQKSSAAVV SINTSKAARN DPRNQDPWFR FFFGEQGNEP QVGLGSGVIV SASGYILTNN HVVESADEIE VVLNDSRRAR AKVVGTDPET DLAVLKIELD RLPAIVLGNS DALQVGDQVL AIGNPFGVGQ TVTSGIISAL GRNQLGINTF ENFIQTDAAI NPGNSGGALV DTSGNLLGIN TAIYSRSGGS MGIGFAIPVA TAKLVLEGIV KDGQVTRGWI GVEPNDLSPE LAETFGVKAK EGVIITGVLQ DGPAARAGIK PGDVITQVAG KPVGNVADLL SSVAALKPGT ASKFSVLRRD SQVELAVTPS VRPKQRRPAP
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