| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2950 |
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| Symbol | |
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| ID | 3960885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3261815 |
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| End bp | 3262555 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637917769 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_524192 |
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| Protein GI | 89901721 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.223031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTTAA TCCCTGCAAT TGACTTAAAA GACGGCCACT GTGTACGCCT CAAACAAGGC
GACATGGATC AATCCACCAC TTTCAGCGAA GAGCCATTCG TCATGGCACG CAACTGGGTC
GATAAAGGCG CCCGCCGCCT GCATCTGGTT GATTTGAATG GTGCTTTTGC CGGGCATCCC
AAGAACGAGC TGGCGATTCG GAAAATTCTG AAAGACGTGG GCAGCGAGGT GGATGTGCAG
TTGGGCGGCG GCATTCGCGA CCTTGACACC ATCGAGCGTT ATCTGGATGC CGGCCTGCGC
TATGTGATCA TCGGCACGGC CGCGGTCAAA AATCCTGGCT TTTTGCAGGA CGCCTGCACC
GCCTTTGGCG GCCACATCAT CGTTGGCCTG GATGCGCGCG ACGGCAAGAT CGCCACCGAC
GGCTGGAGCA AACTGACCCG CCACGACGTG GTGGACCTGG CCAAGAAGTT TGAAGACTAC
GGCGTCGAAT CCATCATCTA CACCGACATC AGCCGCGACG GCATGCTCAG CGGCATCAAC
ATTGAGGCCA CCGTTCGTCT GGCACAGGCG CTGACCATTC CGGTGATTGC CTCCGGCGGT
CTGTCTGGCA TGGCCGACAT TGAAGCGCTG TGTGCGGTCG AAAACGAAGG TATTGAGGGT
GTGATCTGCG GCCGTGCCAT TTACAGCGGC GACCTCGATT TTGAAGCCGC GCAGGAGCGG
GCCAATGAGC TCAACGGCTA A
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| Protein sequence | MLLIPAIDLK DGHCVRLKQG DMDQSTTFSE EPFVMARNWV DKGARRLHLV DLNGAFAGHP
KNELAIRKIL KDVGSEVDVQ LGGGIRDLDT IERYLDAGLR YVIIGTAAVK NPGFLQDACT
AFGGHIIVGL DARDGKIATD GWSKLTRHDV VDLAKKFEDY GVESIIYTDI SRDGMLSGIN
IEATVRLAQA LTIPVIASGG LSGMADIEAL CAVENEGIEG VICGRAIYSG DLDFEAAQER
ANELNG
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