Gene Rfer_2948 details

Gene Information

• Locus tag: Rfer_2948
• Symbol: hisB
• ID: 3960883
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3260321
• End bp: 3260935
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637917767
• Product: imidazoleglycerol-phosphate dehydratase
• Protein accession: YP_524190
• Protein GI: 89901719
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0131] Imidazoleglycerol-phosphate dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.44039
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACGC CCATCGCTCT TGTGCCCGCG CGCACCGCCG AAGTCACTCG CAACACTGCC 
GAGACCCGCA TCACCGTCAA GGTCAACCTC GACGGCAGCG GTCAATCGCA TCTATCGACC 
GGCATCGGTT TTTTTGACCA CATGCTCGAC CAGATCGCGC GCCACGGCCT GATCGACCTC 
GACATCCAGG CCACCGGGGA CCTGCACATC GACGGCCACC ACACGGTCGA AGACGTGGGC 
ATCACGCTCG GGCAAGCGGT CCATCAGGCT GTTGGCGACA AAAAAGGCAT ACGCCGTTAC 
GGCCATGCTT ATGTGCCGCT GGACGAGGCC TTGAGTCGCG TGGTGATCGA TTTTTCCGGC 
CGTCCCGGCT TGGTGATGGA CGTGCCGTTC AAGAGCGGCA TGATCGGCAC TTTCGATGCC 
CAACTGGCGC ATGAGTTTTT TCAGGGCTTT GTCAACCACG CGTTTGTGAC GCTGCACATT 
GACAACCTGA AGGGCGAGAA CGCGCACCAC CAGGCCGAGA CCGTGTTCAA GGCCTTCGCC 
CGCGCCCTGC GCGCCGCGCT GGAGTTCGAT CCGCGCGCCT TGGGGCAAAT TCCCTCGACC 
AAAGGCACAT TGTAG 

 

Protein sequence

MSTPIALVPA RTAEVTRNTA ETRITVKVNL DGSGQSHLST GIGFFDHMLD QIARHGLIDL 
DIQATGDLHI DGHHTVEDVG ITLGQAVHQA VGDKKGIRRY GHAYVPLDEA LSRVVIDFSG 
RPGLVMDVPF KSGMIGTFDA QLAHEFFQGF VNHAFVTLHI DNLKGENAHH QAETVFKAFA 
RALRAALEFD PRALGQIPST KGTL