Gene Rfer_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2947 
Symbol 
ID3960882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3259177 
End bp3260286 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content61% 
IMG OID637917766 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_524189 
Protein GI89901718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAT TGGACGCGGG TAGACGACCA GTGATCCGCC CCGACGTGCA GTCCATGCAC 
GCCTATGCCA TCCAGGATTC AACCGGCATG GTCAAGCTCG ATGCCATGGA GAACCCGCAT
CGCCTGCCGC CCGCCCTGCA ACAAGCGCTG GGGCAACGGC TGGGCGCATT GGCACTCAAC
CGCTACCCGG ATGCGCGGGT GAATAATTTA CGCCAGGCAC TGGCCCACTA TGCCACGATG
CCCGAGGGCT TTGACTTGAT GCTGGGCAAC GGCTCCGACG AGCTCATCAG CCTGCTGGCG
CTGGCCTGCG CCGTGCCGGC CAGCAGCGCC AACGGTTTCA AAAAGGCCAG TGTGCTGGCC
CCGGTGCCGG GCTTTGTGAT GTACGCCCTG AGCGCGCAGT TGCAGGGACT GGACTTTCAC
GGTGTGGCAC TGACCGAAGA TTTCGAGCTG GACGAAGGCG CCATGCTGGC AGCCATCAAG
GAACACCAAC CCACCCTCAC CTATCTGGCC TACCCCAACA ACCCCACGGC CAATTTGTGG
AATGACGCGG TGATCGAGAG CGTCATCGAA GCAGCGGGTG CGCAAGGCGG CCTGGTGGTC
ATCGACGAAG CCTACCAGCC GTTTTCCAGC AAAAGCTACA TCGACCGGCT GGCGCGGCAT
CACCACGTGC TGCTGCTGCG AACGCTCTCC AAATTTGGGC TGGCCGGTAT CCGCCTGGGT
TACCTGATGG GCCGGCGCGA GTTGATCGCC GAGATCGACA AGGTGCGCCC GCCCTACAAC
GTGAGCGTTT TGAATTGCGA GTGCGCCCTG TTTGCGCTCG AACACCAGGA AGTATTTGCA
GCGCAAGCCC TTGATCTGCG GGCCCAACGT GCTCTTCTTT TTGAAGAGTT GGCCAAGTTG
CCCGGCGTGC ACGCCTACCC CAGCGAGGCC AACATGTTGC TGGTGCGCGT ACCTGACGCG
CAAAAGACCT TTGAAGGCAT GCGATTGCGC AAGGTGCTGG TCAAGAATGT CTCCACCCTG
CACCCCTTGC TGGCCAACTG CCTGCGTTTG ACGGTGGGAA CAAAGGATGA AAACCAGCAG
ATGCTGGCGG CGCTGCGAAA CTGCCTCTGA
 
Protein sequence
MSALDAGRRP VIRPDVQSMH AYAIQDSTGM VKLDAMENPH RLPPALQQAL GQRLGALALN 
RYPDARVNNL RQALAHYATM PEGFDLMLGN GSDELISLLA LACAVPASSA NGFKKASVLA
PVPGFVMYAL SAQLQGLDFH GVALTEDFEL DEGAMLAAIK EHQPTLTYLA YPNNPTANLW
NDAVIESVIE AAGAQGGLVV IDEAYQPFSS KSYIDRLARH HHVLLLRTLS KFGLAGIRLG
YLMGRRELIA EIDKVRPPYN VSVLNCECAL FALEHQEVFA AQALDLRAQR ALLFEELAKL
PGVHAYPSEA NMLLVRVPDA QKTFEGMRLR KVLVKNVSTL HPLLANCLRL TVGTKDENQQ
MLAALRNCL