Gene Rfer_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2939 
Symbol 
ID3960874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3252966 
End bp3253538 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content57% 
IMG OID637917758 
Producttoluene tolerance 
Protein accessionYP_524181 
Protein GI89901710 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.379159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAC ACGCGGCGGA TGAAGCAGCC GATGCTTTCA TCAAACGTTT GTCCACCGAG 
GTTCTCAACA GCATCAAGGC CGACAAATCA GTTCAAAGCG GCGACGTTTC CCGGATCGTT
GCCTTGGTGG ACACCCTGGT GATGCCCAAC GTTGATTTCA AACGCATGAC GGCCTCGGCG
GTGGGGCCCA AGTGGCGCCA GGCCACGCCC GAACAGCAAC AGCGCTTGCA GGAAGAGTTC
AAGATTTTGC TGGTGCGCAC CTATGCCGGT GCCTTGACCC AGGTCAACGA CGTGACCTTC
AGCGTCAAAC CCATGCACTC GGGCGCTGAC GATAAAGAAG TGGTCGTACG CACTGAAATC
AAGGGTCGGG GCGACCCGGT TCAACTCGAC TACCGACTGG AAAGGACGCC TGGCGAAGGT
GCAGGCTGGA AAATTTATAA CCTGAATGTA CTGGGTGTGT GGCTGGTCGA CACCTACCGC
AGCCAGTTTG CGCAGGAAAT CAATGCCAAA GGCATTGACG GCCTGATTGC CACCCTGGTG
GAACGCAACA AGACCAACGC CAAGAAGGGA TGA
 
Protein sequence
MPVHAADEAA DAFIKRLSTE VLNSIKADKS VQSGDVSRIV ALVDTLVMPN VDFKRMTASA 
VGPKWRQATP EQQQRLQEEF KILLVRTYAG ALTQVNDVTF SVKPMHSGAD DKEVVVRTEI
KGRGDPVQLD YRLERTPGEG AGWKIYNLNV LGVWLVDTYR SQFAQEINAK GIDGLIATLV
ERNKTNAKKG