Gene Rfer_2937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2937 
Symbol 
ID3960872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp3251567 
End bp3252055 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID637917756 
Producthypothetical protein 
Protein accessionYP_524179 
Protein GI89901708 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.887715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCT CGAAAAATGA TGTCTGGGTT GGCCTGTTTG TGCTGATCGG GGCGGCGGCC 
ATTCTGTTCC TGGCCTTGCA GGCAGCCAAT TTGTTGACCC TGAGTTTTGA AAAAACCTAC 
CAGGTGAGCG CCAAATTTGA CAACATTGGC GGACTCAAGC CCAAAGCAGC AATCCGCAGT 
GCGGGCGTGG TGGTCGGCCG GGTAGAAAAA ATAGTGTTTG ATGACAAATC ATTTCAGGCC 
CGCGTGACCC TGGCACTGGA AAAGCAGTAT GTATTCCCCA AGGACAGTTC CCTTAAAATT 
CTCACCAGCG GCTTGCTCGG TGAGCAATAT TTGGGGCTGG AGCCCGGTGC CGATGAGAAA 
ACGCTGGCCG CTGGTGACAC CATCTCCAGC ACGCAGTCGG CGGTGGTGCT GGAAAATCTG 
ATCAGTCAAT TTTTGTTCAG CAAGGCTGCC GATAGCAGCA CGCCTGCTGC CGATGGGGTC 
AAAAAATGA
 
Protein sequence
MQRSKNDVWV GLFVLIGAAA ILFLALQAAN LLTLSFEKTY QVSAKFDNIG GLKPKAAIRS 
AGVVVGRVEK IVFDDKSFQA RVTLALEKQY VFPKDSSLKI LTSGLLGEQY LGLEPGADEK 
TLAAGDTISS TQSAVVLENL ISQFLFSKAA DSSTPAADGV KK