Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2933 |
Symbol | |
ID | 3960868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3243614 |
End bp | 3248347 |
Gene Length | 4734 bp |
Protein Length | 1577 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917752 |
Product | glutamate synthase (ferredoxin) |
Protein accession | YP_524175 |
Protein GI | 89901704 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0069] Glutamate synthase domain 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.761272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGGG CTGCCGAGAT CAAGCATCTC CAGGAACACG GTTTGTACTC ATCCACCCAG GAGCACGATG CGTGTGGTGT GGGTTTTGTG GCGCACATCA AAGGCGTCAA GTCGCATGAC ATCGTTCAAA ACGCCTTGAA GATTCTGGAG AACCTGGACC ATCGGGGTGC CGTCGGCGCC GACAAGCTGA TGGGCGACGG TGCGGGCATC TTGATTCAGT TGCCCGACGC GCTGTACCGC GAAGAAATGG CCGCACAGGG CGTCACCCTG CCCCCGTTTG GCGAGTACGG CGTGGGCATG ATCTTTTTGC CCAAGGAGCA CGCCAGCCGG CTCGCCTGCG AGGAGGAGTT GGAGCGCGCC ATCAAGGCCG AGGGACAGGT GTTGCTGGGC TGGCGCGATG TGCCGGTGAA CCGCGACATG CCGATGTCGC CCACCGTGCG TCTGAAAGAG CCGGTTCTCA AACAACTGTT TATTGGCCGC GGCAACGATG TGATCGTGCA GGACGCGCTG GAGCGCAAGC TGTACGTGAT CCGCAAGACC GCCAGCGCCG CCATCCAGAA CCTGCAGCTC AAGCACAGCA AAGAGTATTA CGTGCCCAGC ATGTCGACCC GTACCGTGAT TTACAAAGGC TTGTTGCTGG CCGATCAGGT GAGCACCTAC TATCTGGATC TGCAGGATGA GCGCTGCGTC TCGGCGCTGG GCCTGGTGCA TCAGCGCTTT TCCACCAACA CCTTCCCCGA GTGGCCGCTG GCACACCCGT ACCGCTATGT GGCGCACAAC GGCGAGATCA ACACCGTCAA GGGCAACTAC AACTGGATGA AGGCGCGCGA AGGCGTGATG TCCTCCCCCG TGCTGGGGGC CGATCTGCAA AAGCTGTACC CGATCAGCTT CCCCGACCAG TCCGACACCG CCACCTTTGA CAACTGTCTG GAACTGCTGA CCATGGCCGG CTACCCGCTG GCACAGGCCG TGATGATGAT GATCCCGGAG CCGTGGGAAC AACACGCCAC CATGGAGGCG CGTCGCAAGG CGTTTTATGA GTACCACGCC GCCATGATGG AGCCGTGGGA CGGCCCGGCC AGCATCGTGT TCACCGACGG CCGCCAGATT GGCGCCACGC TCGACCGCAA CGGCCTGCGC CCTTCGCGCT ACTGCATCAC CGATGACGAT CTGGTCATCA TGGCATCCGA GTCCGGCGTG TTGCCCGTTC CGGAAAACAA AATCGTGCGC AAATGGCGGC TGCAGCCCGG CAAGATGTTC CTGATCGACC TGGAACAGGG CCGCATGATC GACGACGACG AGCTCAAGGC CAATCTGGTC AACAGCAAGC CGTATCAGCA ATGGATCGAG AACCTGCGCA TTCGCCTCGA TGATGTGGAG GGTGGCAGCG AGCCCGCCTC GGCGTCTGAA GTGGCGGTCA GTCTGCTCGA CCGCCAGCAG GCCTTTGGTT TCACGCAGGA AGACATCAAG TTTCTGATCG CCCCCATGGC CACCGCCGGT GAAGAAGCCA TCGGCTCCAT GGGCAACGAC AGCCCGCTGG CCGTCCTGAG CGACAAAAAC AAGCCGCTCT ACAACTACTT CAAGCAGTTG TTTGCCCAGG TGACCAACCC GCCCATCGAC CCGATTCGCG AAGCGATTGT GATGAGTCTG GTGTCCTTTG TCGGCCCCAA GCCAAACCTG CTCGACATCA ACCAGGTCAA CCCGCCGATG CGCCTCGAAG TCAGCCAGCC GGTGCTGGAC TTTGCTGACA TGGCCAAGCT GCGCGACATC GAAAAATACA CGCGCGGCAA GTTCCGCAGC CACACGCTCG ACATCACCTA CCCACTGGCC TGGGGCCACG AGGGCGTGGA AGCGCAATTG GCGTCCCTCT GCGCCGAAGC GGTGGACGCG ATCAAGGGTG GAAACAACAT CCTGATCATC AGCGACCGCG GCATCAGCGC GACGCAGGTC GCCATACCCG CTCTGCTGGC GCTGTCCGCC GTTCACCAAC ACCTGGTGCG CGCCGGCTTG CGCACCACCG CCGGTCTGGT GGTCGAGACC GGCACCGCAC GTGAAGTGCA TCACTTTGGT GTACTCGCCG GCTATGGCGC CGAAGCGGTG CACCCGTACC TGGCGATGGA AACGCTGGCC GATATCTGCA AGGATCTGCC GGGTGAACTC AGCGCCGAAA AAGCCATCTA CAACTACGTC AAGGCGGTCG GCAAGGGACT CTCCAAGATC ATGTCCAAGA TGGGCGTGAG CACCTACATG AGCTACTGCG GCGCGCAGTT GTTCGAGGCC ATTGGCTTGT CCACCGATGT GGTGGCCAAG TACTTCACGG GCACCCCGAG CCGGGTCGAG GGCATCACCG TGTTCGACAT TGCTGAAGAG GTCATCCGCA TGCACAAGGC GGCTTTTGGC TTGGATCCGG TGCTGGCCAG CATGCTCGAT GCCGGTGGCG AATACGCCTG GCGCACCCGC GGTGAAGACC ACATGTGGAC GCCCGACGCG ATTGCCAAAC TGCAGCACAG CACACGCGCC AACAGCTGGC ACACGTACAA GGAATACGCG CAGATCGTCA ACGACCAGAG CAAACGCCAC ATGACGCTGC GCGGCTTGTT TGAATTCAAG ATTGACCCCG CCAAAGCCAT TCCGGTGGAG CAAGTGGAGT CAGCCGCGGA GATTGTCAAA CGCTTTGCCA CCGGCGCCAT GTCGCTCGGC TCGATTTCAA CCGAAGCACA CGCCACGCTG TCGGTGGCCA TGAACCGCCT GGGCGGCAAG AGCAATACCG GCGAGGGCGG CGAGGACCCG GCGCGTTACC GCAACGAACT CAAAGGCATC CCGATCAAAC TCGGCGACAC ACTCAAAAGC GTGATTGGTG CCGATGTCGT GGAAGTCGAT CTGCCTTTGC AGGACGGTGA CTCGTTACGT TCACGCATCA AGCAGGTGGC CTCCGGTCGC TTTGGCGTCA CCGCTGAGTA CCTCACCAGC GCAGACCAGA TCCAGATCAA GATGGCGCAA GGTGCCAAGC CGGGTGAAGG CGGTCAATTG CCGGGCGGCA AGGTGTCGGA CTACATCGGT CGCCTGCGCC ACTCGATACC CGGCGTGCCG CTGATTTCGC CGCCGCCGCA CCATGATATT TACTCGATCG AGGATCTGGC GCAACTGATT CACGACCTGA AAAACGTGGC GCCGCACGCC AGCATCAGCG TCAAGCTGGT GAGTGAGATT GGCGTCGGCA CCATCGCGGC TGGCGTTGCC AAGTGCAAGG CCGACCATGT GGTGATCGCA GGCCATGATG GCGGCACCGG TGCCTCGCCC TGGTCGTCCA TCAAACACGC GGGCAGCCCC TGGGAAATCG GTCTGGCTGA AACCCAGCAA ACCCTGGTGC TCAACCGCTT GCGTTCGCGC ATCCGGGTGC AGACCGATGG CCAGATCAAA ACCGGGCGCG ACGTGGCGAT TGGTGCCCTG CTGGGCGCTG ACGAATTTGG CTTTGCCACC GCCCCGCTGG TGGTCGAAGG CTGCATCATG ATGCGCAAAT GCCACCTCAA CACCTGCCCG GTCGGCGTCG CCACGCAAGA CCCGGCGCTG CGTCAAAAAT TCTCCGGCAA GCCCGAGCAT GTGGTGAATT ATTTCTTTTT CGTTGCGGAA GAAGTGCGCC ACATCATGGC CCAGTTGGGC ATCGCCAGGT TTGACGACCT GATTGGTCGC TCTGACCTGC TCGACATGCG CCAAGGCATC GAACACTGGA AAGCCAGCGG CCTGGACTTC GGCCGTTTGT TTGCGCAACC CAATGCCCCG GCCGAGGTAC CGCGCTACCA GACCGAAACG CAAGACCATG GCCTGGCCAA ATCGCTGGAC AACATCCTGA TCGCCAAGAG CCGCGCCGCC ATCGACAAGG GCGAGAAAGT GCATTTCATG GAAATGGCGC GCAACGTCAA TCGCTCCGTC GGCGCCATGC TCTCCGGCGC GGTGACGCAA GTCCACCCTG AAGGCTTGCC CGACAACACC ATCCGCATCC AGTTGGAGGG CACCGGCGGC CAGTCCTTTG GTGCATTCCT GGCGCGCGGC ATCACGCTTT ATCTGATTGG GGACGCCAAC GACTACACCG GCAAAGGACT CAGTGGCGGG CGGGTCGTGG TACGCCCCAG CATCGACTTC CGGGGTGACG CGGTCAAGAA CACCATCGTC GGCAACACGG TGATGTATGG CGCCACCAGT GGCGAAGCCT ATTTCAGCGG TGTCGCTGGC GAGCGCTTTG CGGTGCGTCT GTCGGGCGCG ACGACGGTGG TGGAAGGCAC CGGTGACCAT GGCTGCGAGT ACATGACTGG CGGCACCGTG GCCGTGCTGG GTATCACCGG ACGCAATTTT GCAGCCGGCA TGAGCGGCGG CATCGCTTAC GTTTATGACG AGGACGGCAA GTTCGCCAAG CGCTGCAACA CCGCCATGGT GTCGCTGACC AAGGTGTTGA CAGCCGAGGA GCAGCGCGAG GCGATCGAGG TCAGCTTGTG GCACCGCGGC CAAAGCGATG AGGCGCAGCT GAAGAAACTG CTGGAAGAGC ACAACCGCTG GACCGGCAGC AAGCGCGCCC GCGAATTGCT GGACAACTGG GAGCTTGCCC GGCTCAAGTT CGTCAAGGTA TTCCCCAATG AATACAAACG CGCGCTCGCC ACAATTCATG CACAAAAAGA GGCTCTGGCC CTCACCAGTC GTGCTCAGGC AGCTACTAAA AAAGAAGTAG TTCCCGCTAA ATAA
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Protein sequence | MTRAAEIKHL QEHGLYSSTQ EHDACGVGFV AHIKGVKSHD IVQNALKILE NLDHRGAVGA DKLMGDGAGI LIQLPDALYR EEMAAQGVTL PPFGEYGVGM IFLPKEHASR LACEEELERA IKAEGQVLLG WRDVPVNRDM PMSPTVRLKE PVLKQLFIGR GNDVIVQDAL ERKLYVIRKT ASAAIQNLQL KHSKEYYVPS MSTRTVIYKG LLLADQVSTY YLDLQDERCV SALGLVHQRF STNTFPEWPL AHPYRYVAHN GEINTVKGNY NWMKAREGVM SSPVLGADLQ KLYPISFPDQ SDTATFDNCL ELLTMAGYPL AQAVMMMIPE PWEQHATMEA RRKAFYEYHA AMMEPWDGPA SIVFTDGRQI GATLDRNGLR PSRYCITDDD LVIMASESGV LPVPENKIVR KWRLQPGKMF LIDLEQGRMI DDDELKANLV NSKPYQQWIE NLRIRLDDVE GGSEPASASE VAVSLLDRQQ AFGFTQEDIK FLIAPMATAG EEAIGSMGND SPLAVLSDKN KPLYNYFKQL FAQVTNPPID PIREAIVMSL VSFVGPKPNL LDINQVNPPM RLEVSQPVLD FADMAKLRDI EKYTRGKFRS HTLDITYPLA WGHEGVEAQL ASLCAEAVDA IKGGNNILII SDRGISATQV AIPALLALSA VHQHLVRAGL RTTAGLVVET GTAREVHHFG VLAGYGAEAV HPYLAMETLA DICKDLPGEL SAEKAIYNYV KAVGKGLSKI MSKMGVSTYM SYCGAQLFEA IGLSTDVVAK YFTGTPSRVE GITVFDIAEE VIRMHKAAFG LDPVLASMLD AGGEYAWRTR GEDHMWTPDA IAKLQHSTRA NSWHTYKEYA QIVNDQSKRH MTLRGLFEFK IDPAKAIPVE QVESAAEIVK RFATGAMSLG SISTEAHATL SVAMNRLGGK SNTGEGGEDP ARYRNELKGI PIKLGDTLKS VIGADVVEVD LPLQDGDSLR SRIKQVASGR FGVTAEYLTS ADQIQIKMAQ GAKPGEGGQL PGGKVSDYIG RLRHSIPGVP LISPPPHHDI YSIEDLAQLI HDLKNVAPHA SISVKLVSEI GVGTIAAGVA KCKADHVVIA GHDGGTGASP WSSIKHAGSP WEIGLAETQQ TLVLNRLRSR IRVQTDGQIK TGRDVAIGAL LGADEFGFAT APLVVEGCIM MRKCHLNTCP VGVATQDPAL RQKFSGKPEH VVNYFFFVAE EVRHIMAQLG IARFDDLIGR SDLLDMRQGI EHWKASGLDF GRLFAQPNAP AEVPRYQTET QDHGLAKSLD NILIAKSRAA IDKGEKVHFM EMARNVNRSV GAMLSGAVTQ VHPEGLPDNT IRIQLEGTGG QSFGAFLARG ITLYLIGDAN DYTGKGLSGG RVVVRPSIDF RGDAVKNTIV GNTVMYGATS GEAYFSGVAG ERFAVRLSGA TTVVEGTGDH GCEYMTGGTV AVLGITGRNF AAGMSGGIAY VYDEDGKFAK RCNTAMVSLT KVLTAEEQRE AIEVSLWHRG QSDEAQLKKL LEEHNRWTGS KRARELLDNW ELARLKFVKV FPNEYKRALA TIHAQKEALA LTSRAQAATK KEVVPAK
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