Gene Rfer_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2933 
Symbol 
ID3960868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3243614 
End bp3248347 
Gene Length4734 bp 
Protein Length1577 aa 
Translation table11 
GC content61% 
IMG OID637917752 
Productglutamate synthase (ferredoxin) 
Protein accessionYP_524175 
Protein GI89901704 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.761272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGGG CTGCCGAGAT CAAGCATCTC CAGGAACACG GTTTGTACTC ATCCACCCAG 
GAGCACGATG CGTGTGGTGT GGGTTTTGTG GCGCACATCA AAGGCGTCAA GTCGCATGAC
ATCGTTCAAA ACGCCTTGAA GATTCTGGAG AACCTGGACC ATCGGGGTGC CGTCGGCGCC
GACAAGCTGA TGGGCGACGG TGCGGGCATC TTGATTCAGT TGCCCGACGC GCTGTACCGC
GAAGAAATGG CCGCACAGGG CGTCACCCTG CCCCCGTTTG GCGAGTACGG CGTGGGCATG
ATCTTTTTGC CCAAGGAGCA CGCCAGCCGG CTCGCCTGCG AGGAGGAGTT GGAGCGCGCC
ATCAAGGCCG AGGGACAGGT GTTGCTGGGC TGGCGCGATG TGCCGGTGAA CCGCGACATG
CCGATGTCGC CCACCGTGCG TCTGAAAGAG CCGGTTCTCA AACAACTGTT TATTGGCCGC
GGCAACGATG TGATCGTGCA GGACGCGCTG GAGCGCAAGC TGTACGTGAT CCGCAAGACC
GCCAGCGCCG CCATCCAGAA CCTGCAGCTC AAGCACAGCA AAGAGTATTA CGTGCCCAGC
ATGTCGACCC GTACCGTGAT TTACAAAGGC TTGTTGCTGG CCGATCAGGT GAGCACCTAC
TATCTGGATC TGCAGGATGA GCGCTGCGTC TCGGCGCTGG GCCTGGTGCA TCAGCGCTTT
TCCACCAACA CCTTCCCCGA GTGGCCGCTG GCACACCCGT ACCGCTATGT GGCGCACAAC
GGCGAGATCA ACACCGTCAA GGGCAACTAC AACTGGATGA AGGCGCGCGA AGGCGTGATG
TCCTCCCCCG TGCTGGGGGC CGATCTGCAA AAGCTGTACC CGATCAGCTT CCCCGACCAG
TCCGACACCG CCACCTTTGA CAACTGTCTG GAACTGCTGA CCATGGCCGG CTACCCGCTG
GCACAGGCCG TGATGATGAT GATCCCGGAG CCGTGGGAAC AACACGCCAC CATGGAGGCG
CGTCGCAAGG CGTTTTATGA GTACCACGCC GCCATGATGG AGCCGTGGGA CGGCCCGGCC
AGCATCGTGT TCACCGACGG CCGCCAGATT GGCGCCACGC TCGACCGCAA CGGCCTGCGC
CCTTCGCGCT ACTGCATCAC CGATGACGAT CTGGTCATCA TGGCATCCGA GTCCGGCGTG
TTGCCCGTTC CGGAAAACAA AATCGTGCGC AAATGGCGGC TGCAGCCCGG CAAGATGTTC
CTGATCGACC TGGAACAGGG CCGCATGATC GACGACGACG AGCTCAAGGC CAATCTGGTC
AACAGCAAGC CGTATCAGCA ATGGATCGAG AACCTGCGCA TTCGCCTCGA TGATGTGGAG
GGTGGCAGCG AGCCCGCCTC GGCGTCTGAA GTGGCGGTCA GTCTGCTCGA CCGCCAGCAG
GCCTTTGGTT TCACGCAGGA AGACATCAAG TTTCTGATCG CCCCCATGGC CACCGCCGGT
GAAGAAGCCA TCGGCTCCAT GGGCAACGAC AGCCCGCTGG CCGTCCTGAG CGACAAAAAC
AAGCCGCTCT ACAACTACTT CAAGCAGTTG TTTGCCCAGG TGACCAACCC GCCCATCGAC
CCGATTCGCG AAGCGATTGT GATGAGTCTG GTGTCCTTTG TCGGCCCCAA GCCAAACCTG
CTCGACATCA ACCAGGTCAA CCCGCCGATG CGCCTCGAAG TCAGCCAGCC GGTGCTGGAC
TTTGCTGACA TGGCCAAGCT GCGCGACATC GAAAAATACA CGCGCGGCAA GTTCCGCAGC
CACACGCTCG ACATCACCTA CCCACTGGCC TGGGGCCACG AGGGCGTGGA AGCGCAATTG
GCGTCCCTCT GCGCCGAAGC GGTGGACGCG ATCAAGGGTG GAAACAACAT CCTGATCATC
AGCGACCGCG GCATCAGCGC GACGCAGGTC GCCATACCCG CTCTGCTGGC GCTGTCCGCC
GTTCACCAAC ACCTGGTGCG CGCCGGCTTG CGCACCACCG CCGGTCTGGT GGTCGAGACC
GGCACCGCAC GTGAAGTGCA TCACTTTGGT GTACTCGCCG GCTATGGCGC CGAAGCGGTG
CACCCGTACC TGGCGATGGA AACGCTGGCC GATATCTGCA AGGATCTGCC GGGTGAACTC
AGCGCCGAAA AAGCCATCTA CAACTACGTC AAGGCGGTCG GCAAGGGACT CTCCAAGATC
ATGTCCAAGA TGGGCGTGAG CACCTACATG AGCTACTGCG GCGCGCAGTT GTTCGAGGCC
ATTGGCTTGT CCACCGATGT GGTGGCCAAG TACTTCACGG GCACCCCGAG CCGGGTCGAG
GGCATCACCG TGTTCGACAT TGCTGAAGAG GTCATCCGCA TGCACAAGGC GGCTTTTGGC
TTGGATCCGG TGCTGGCCAG CATGCTCGAT GCCGGTGGCG AATACGCCTG GCGCACCCGC
GGTGAAGACC ACATGTGGAC GCCCGACGCG ATTGCCAAAC TGCAGCACAG CACACGCGCC
AACAGCTGGC ACACGTACAA GGAATACGCG CAGATCGTCA ACGACCAGAG CAAACGCCAC
ATGACGCTGC GCGGCTTGTT TGAATTCAAG ATTGACCCCG CCAAAGCCAT TCCGGTGGAG
CAAGTGGAGT CAGCCGCGGA GATTGTCAAA CGCTTTGCCA CCGGCGCCAT GTCGCTCGGC
TCGATTTCAA CCGAAGCACA CGCCACGCTG TCGGTGGCCA TGAACCGCCT GGGCGGCAAG
AGCAATACCG GCGAGGGCGG CGAGGACCCG GCGCGTTACC GCAACGAACT CAAAGGCATC
CCGATCAAAC TCGGCGACAC ACTCAAAAGC GTGATTGGTG CCGATGTCGT GGAAGTCGAT
CTGCCTTTGC AGGACGGTGA CTCGTTACGT TCACGCATCA AGCAGGTGGC CTCCGGTCGC
TTTGGCGTCA CCGCTGAGTA CCTCACCAGC GCAGACCAGA TCCAGATCAA GATGGCGCAA
GGTGCCAAGC CGGGTGAAGG CGGTCAATTG CCGGGCGGCA AGGTGTCGGA CTACATCGGT
CGCCTGCGCC ACTCGATACC CGGCGTGCCG CTGATTTCGC CGCCGCCGCA CCATGATATT
TACTCGATCG AGGATCTGGC GCAACTGATT CACGACCTGA AAAACGTGGC GCCGCACGCC
AGCATCAGCG TCAAGCTGGT GAGTGAGATT GGCGTCGGCA CCATCGCGGC TGGCGTTGCC
AAGTGCAAGG CCGACCATGT GGTGATCGCA GGCCATGATG GCGGCACCGG TGCCTCGCCC
TGGTCGTCCA TCAAACACGC GGGCAGCCCC TGGGAAATCG GTCTGGCTGA AACCCAGCAA
ACCCTGGTGC TCAACCGCTT GCGTTCGCGC ATCCGGGTGC AGACCGATGG CCAGATCAAA
ACCGGGCGCG ACGTGGCGAT TGGTGCCCTG CTGGGCGCTG ACGAATTTGG CTTTGCCACC
GCCCCGCTGG TGGTCGAAGG CTGCATCATG ATGCGCAAAT GCCACCTCAA CACCTGCCCG
GTCGGCGTCG CCACGCAAGA CCCGGCGCTG CGTCAAAAAT TCTCCGGCAA GCCCGAGCAT
GTGGTGAATT ATTTCTTTTT CGTTGCGGAA GAAGTGCGCC ACATCATGGC CCAGTTGGGC
ATCGCCAGGT TTGACGACCT GATTGGTCGC TCTGACCTGC TCGACATGCG CCAAGGCATC
GAACACTGGA AAGCCAGCGG CCTGGACTTC GGCCGTTTGT TTGCGCAACC CAATGCCCCG
GCCGAGGTAC CGCGCTACCA GACCGAAACG CAAGACCATG GCCTGGCCAA ATCGCTGGAC
AACATCCTGA TCGCCAAGAG CCGCGCCGCC ATCGACAAGG GCGAGAAAGT GCATTTCATG
GAAATGGCGC GCAACGTCAA TCGCTCCGTC GGCGCCATGC TCTCCGGCGC GGTGACGCAA
GTCCACCCTG AAGGCTTGCC CGACAACACC ATCCGCATCC AGTTGGAGGG CACCGGCGGC
CAGTCCTTTG GTGCATTCCT GGCGCGCGGC ATCACGCTTT ATCTGATTGG GGACGCCAAC
GACTACACCG GCAAAGGACT CAGTGGCGGG CGGGTCGTGG TACGCCCCAG CATCGACTTC
CGGGGTGACG CGGTCAAGAA CACCATCGTC GGCAACACGG TGATGTATGG CGCCACCAGT
GGCGAAGCCT ATTTCAGCGG TGTCGCTGGC GAGCGCTTTG CGGTGCGTCT GTCGGGCGCG
ACGACGGTGG TGGAAGGCAC CGGTGACCAT GGCTGCGAGT ACATGACTGG CGGCACCGTG
GCCGTGCTGG GTATCACCGG ACGCAATTTT GCAGCCGGCA TGAGCGGCGG CATCGCTTAC
GTTTATGACG AGGACGGCAA GTTCGCCAAG CGCTGCAACA CCGCCATGGT GTCGCTGACC
AAGGTGTTGA CAGCCGAGGA GCAGCGCGAG GCGATCGAGG TCAGCTTGTG GCACCGCGGC
CAAAGCGATG AGGCGCAGCT GAAGAAACTG CTGGAAGAGC ACAACCGCTG GACCGGCAGC
AAGCGCGCCC GCGAATTGCT GGACAACTGG GAGCTTGCCC GGCTCAAGTT CGTCAAGGTA
TTCCCCAATG AATACAAACG CGCGCTCGCC ACAATTCATG CACAAAAAGA GGCTCTGGCC
CTCACCAGTC GTGCTCAGGC AGCTACTAAA AAAGAAGTAG TTCCCGCTAA ATAA
 
Protein sequence
MTRAAEIKHL QEHGLYSSTQ EHDACGVGFV AHIKGVKSHD IVQNALKILE NLDHRGAVGA 
DKLMGDGAGI LIQLPDALYR EEMAAQGVTL PPFGEYGVGM IFLPKEHASR LACEEELERA
IKAEGQVLLG WRDVPVNRDM PMSPTVRLKE PVLKQLFIGR GNDVIVQDAL ERKLYVIRKT
ASAAIQNLQL KHSKEYYVPS MSTRTVIYKG LLLADQVSTY YLDLQDERCV SALGLVHQRF
STNTFPEWPL AHPYRYVAHN GEINTVKGNY NWMKAREGVM SSPVLGADLQ KLYPISFPDQ
SDTATFDNCL ELLTMAGYPL AQAVMMMIPE PWEQHATMEA RRKAFYEYHA AMMEPWDGPA
SIVFTDGRQI GATLDRNGLR PSRYCITDDD LVIMASESGV LPVPENKIVR KWRLQPGKMF
LIDLEQGRMI DDDELKANLV NSKPYQQWIE NLRIRLDDVE GGSEPASASE VAVSLLDRQQ
AFGFTQEDIK FLIAPMATAG EEAIGSMGND SPLAVLSDKN KPLYNYFKQL FAQVTNPPID
PIREAIVMSL VSFVGPKPNL LDINQVNPPM RLEVSQPVLD FADMAKLRDI EKYTRGKFRS
HTLDITYPLA WGHEGVEAQL ASLCAEAVDA IKGGNNILII SDRGISATQV AIPALLALSA
VHQHLVRAGL RTTAGLVVET GTAREVHHFG VLAGYGAEAV HPYLAMETLA DICKDLPGEL
SAEKAIYNYV KAVGKGLSKI MSKMGVSTYM SYCGAQLFEA IGLSTDVVAK YFTGTPSRVE
GITVFDIAEE VIRMHKAAFG LDPVLASMLD AGGEYAWRTR GEDHMWTPDA IAKLQHSTRA
NSWHTYKEYA QIVNDQSKRH MTLRGLFEFK IDPAKAIPVE QVESAAEIVK RFATGAMSLG
SISTEAHATL SVAMNRLGGK SNTGEGGEDP ARYRNELKGI PIKLGDTLKS VIGADVVEVD
LPLQDGDSLR SRIKQVASGR FGVTAEYLTS ADQIQIKMAQ GAKPGEGGQL PGGKVSDYIG
RLRHSIPGVP LISPPPHHDI YSIEDLAQLI HDLKNVAPHA SISVKLVSEI GVGTIAAGVA
KCKADHVVIA GHDGGTGASP WSSIKHAGSP WEIGLAETQQ TLVLNRLRSR IRVQTDGQIK
TGRDVAIGAL LGADEFGFAT APLVVEGCIM MRKCHLNTCP VGVATQDPAL RQKFSGKPEH
VVNYFFFVAE EVRHIMAQLG IARFDDLIGR SDLLDMRQGI EHWKASGLDF GRLFAQPNAP
AEVPRYQTET QDHGLAKSLD NILIAKSRAA IDKGEKVHFM EMARNVNRSV GAMLSGAVTQ
VHPEGLPDNT IRIQLEGTGG QSFGAFLARG ITLYLIGDAN DYTGKGLSGG RVVVRPSIDF
RGDAVKNTIV GNTVMYGATS GEAYFSGVAG ERFAVRLSGA TTVVEGTGDH GCEYMTGGTV
AVLGITGRNF AAGMSGGIAY VYDEDGKFAK RCNTAMVSLT KVLTAEEQRE AIEVSLWHRG
QSDEAQLKKL LEEHNRWTGS KRARELLDNW ELARLKFVKV FPNEYKRALA TIHAQKEALA
LTSRAQAATK KEVVPAK