Gene Rfer_2926 details

Gene Information

• Locus tag: Rfer_2926
• Symbol: aroB
• ID: 3960443
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3237589
• End bp: 3238695
• Gene Length: 1107 bp
• Protein Length: 368 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637917745
• Product: 3-dehydroquinate synthase
• Protein accession: YP_524168
• Protein GI: 89901697
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCA CCGACCTCCA AACCGTTGCC ATTGACCTGC AAAGCCGCAG CTACCACATC 
GCCATTCGCG GCTCGCTGTT TGACAACCCC CTGAGCTACA CCGAATTGCC CGCCGCCAGC 
AGCGCGCTGA TCGTGACCAA CACCACGGTC GGGCCGCTCT ATGCCGAGCG CCTGCAGAGC 
GCTTTGCTGG GCAAGTTCAA ACACATCCAC ACGGTCGTGC TGCCCGACGG CGAGGCGTTC 
AAGACCTGGC AGACGCTGAA CCTGATTTTT GATGCCTTGC TGTCGCACGG TTGCGACCGC 
AAAACCATTC TGTTTGCGCT GGGTGGCGGC GTGGTCGGCG ACATGACCGG TTTTGCGGCC 
GCCAGCTACA TGCGCGGTGT TCCGTTTGTG CAGGTGCCCA CGACACTGCT GGCGCAGGTT 
GATTCGTCGG TGGGAGGCAA GACCGGCATC AACCATCCGC TGGGCAAGAA CATGATTGGC 
GCGTTTTACC AGCCGCTCAA AGTGGTGTGT GACCTGGACA CGCTCAAGAC GCTTCCCGCA 
CGCGAGCTCA GTGCCGGGCT GGCCGAAGTC ATCAAATACG GGCCGATTGC CGACCTGGAA 
TTTCTGGCCT GGATTGAGGC CCATATCGAC GCCCTCATGG CGCGCGAGCC GCAGGCACTG 
GCGCACGCCG TCAAACGCAG TTGCGAAATC AAGGCCTGGG TGGTGGGGCA AGACGAACGC 
GAGGCGGGCC TGCGTGCCAT CCTCAACTTT GGTCACACCT TTGGTCACGC GATTGAGGCC 
GGGCTGGGCT ACGGCGAGTG GTTGCATGGC GAGGCTGTGG GTTGCGGCAT GGTGATGGCG 
GCCCATCTGT CGCTCAGACT GGGGCTGATT GATGCAGCGC TGGTGCAACG TCTGACCACG 
CTGATTCAAA AGGCCGGCTT ACCCGTCAAG GGGCCACAAT TGTCAGCCTC CGACAATGCC 
GGGCGCTACC TGGAACTGAT GCGCCTGGAC AAGAAGGCCG AAGGCGGCGA GATCAAATTC 
GTCGTGATCG ATGGCCCAGG CAACGCCAGC GTGCGCAGCG CACCGGATGC ACTGGTGCGT 
GAAGTCATCC ATGATTGCTG CACCTGA 

 

Protein sequence

MNATDLQTVA IDLQSRSYHI AIRGSLFDNP LSYTELPAAS SALIVTNTTV GPLYAERLQS 
ALLGKFKHIH TVVLPDGEAF KTWQTLNLIF DALLSHGCDR KTILFALGGG VVGDMTGFAA 
ASYMRGVPFV QVPTTLLAQV DSSVGGKTGI NHPLGKNMIG AFYQPLKVVC DLDTLKTLPA 
RELSAGLAEV IKYGPIADLE FLAWIEAHID ALMAREPQAL AHAVKRSCEI KAWVVGQDER 
EAGLRAILNF GHTFGHAIEA GLGYGEWLHG EAVGCGMVMA AHLSLRLGLI DAALVQRLTT 
LIQKAGLPVK GPQLSASDNA GRYLELMRLD KKAEGGEIKF VVIDGPGNAS VRSAPDALVR 
EVIHDCCT