Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2925 |
Symbol | aroK |
ID | 3960442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3237053 |
End bp | 3237592 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917744 |
Product | shikimate kinase |
Protein accession | YP_524167 |
Protein GI | 89901696 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATCGTCT CCCTCATCGG CCTCCCCGGT TCCGGCAAAT CCACCGTCGG GCGTCAACTC GCCCGGCGGC TGCAGCTTCC CTTCTTTGAC TCCGACCATC TGATTGAGCA GCAACTGGGC TGCTCAATCC GCGAGTATTT CGAGCGCGAG GGCGAAGACC GGTTCCGCGA TGTCGAAGAA TCGGTCATCG ACGAACTCAC GCAAAAACAA ACCGGGGTTG TATCAACCGG TGGCGGCGTG ATTTTGCGGC CCGCCAACCG CCAGCATCTG CGCGAGCGTT GCCGGGTGGT GTACCTCAAT TCCTCGCCTG ACGAGCTGTT CCGGCGCCTG CGCCATGATG TGAACCGACC TTTGTTGCAA GTCGCCGACC CCCTGGCGCG TCTGCGTGAC CTGCACACGC TGCGCGATCC GCTCTACCGG GAAACCGCAC ACTTCATCAT CGAGACCGGT CGCCCATCGG TCGCCACCCT GGTTAACATG ATCGTGATGC AGCTGGAGTT GGCGGGTGTG CCTCTCAAGC CCCTAAACTC ACCCCCATGA
|
Protein sequence | MIVSLIGLPG SGKSTVGRQL ARRLQLPFFD SDHLIEQQLG CSIREYFERE GEDRFRDVEE SVIDELTQKQ TGVVSTGGGV ILRPANRQHL RERCRVVYLN SSPDELFRRL RHDVNRPLLQ VADPLARLRD LHTLRDPLYR ETAHFIIETG RPSVATLVNM IVMQLELAGV PLKPLNSPP
|
| |