| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2924 |
|---|
| Symbol | |
|---|
| ID | 3960441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3235155 |
|---|
| End bp | 3237056 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637917743 |
|---|
| Product | Ig-like, group 1 |
|---|
| Protein accession | YP_524166 |
|---|
| Protein GI | 89901695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGCA GGAAGATGGA TATGAAGTTA TTGAAATTTG TTGTCGGGTT GACGGTTGCG
ATGGCACTGA CGGCGTGCGG TGGGGGCGGG GGCAATCCGG GAACGGTGAG CGGAGGGTCA
CTGCCGGTTG CTAGCGCACC CGCAGTAGGG GCGACAGCAG CAACTATTGA AGTGCTGACA
TCGGCCAATT CACTACTTTC GTCAGGTTCT GAAGCAGTCA TTACCGCATT CGTAAAGAAT
GGTTCTAATG TAGGTCTGGC GAATCAGGCG GTCACGTTTT CAGCCTCATC TGGCACTCTT
CAGGTCACGA CTTCCACGAC GGATTCGACC GGTGCTGTAA CAGCCAAATT GATCGCTGGC
GGTGATAAAT CCATTCGTGA CATCACAGTG GCAGTGACCG CAGGTTCGGT TTCCGGCAGT
GTCGTCGTCC CTGTGACTGG AACCCGCGTT TCAATTGCCG GCAGCGGCTC ATTGCAAGCC
GGTGGGGCAG CCGCTCAGTA CACAATCCGC GCTGTCGATT CATCAGGCAA CCCAATCGGC
GGAGCCACAG TCGCGGTAAG TTCGGCTTTG GGCAATGCTG TTAGCTCGTC CTCCTTGTCC
ACCGATTCGA CTGGTACTGC AAAGTTTCTC TATACGCCGA ACAAAGCTGG AACTGATACA
TTGACTGTTT CAGGTCTGGG TACCAATGCA AGTTCTACTG TCATCATCAA CGCCATTGAT
TTTGTTGCGC TTAGCCCTTC CAACGATACG GCGATTGCCA TTGGCGCATC CCAGACCATA
ACTGTCCAGT ACAAACTTTC TGGTGCGGGG GTGGCTGGCC AAACAGTGGC ATTTAGCACG
ACCCGTGGAA CCTTCGTTAC ATCAACCGCC ACCACGGACG CCAATGGTCA AGCATCCGCA
GTCCTTTCAT CGACTACAGC AGGGCCGGCT GTCGTAGCCG CGCAAATTGT CGGTGTCGGG
TCGGTTAATT TACCTGTTCA GTTTGTTGCA ACCACCCCGG CCACCATCGT GGTTCAATCG
AATCCTGGAA GTGTGCTGCC CAATTCATCA GGAACAACCA ATCAAAGCAC TATTGAAGCG
ATAGTGCGAG ATTCCAATGG CAACGCAGTG GCAAATCGAC AAGTCAACTT CACGGCTGTG
CAAGACCTTA GCAACGGTAT TCTGTCTCCT GGGACTGCCA CAACGGATGC CAATGGACGG
GCTCAGGTTC AGTTTATTCC TGGAGCTTCT TCAACACCTG CCGATGGTGT AACAATTCAA
GCTACAGTCG CTTCCACTGC GATAACCGGG ACAACATCTC TGACGGTAAA CGGAAAGGCA
CTGTTTATAA CAATTGCCTT TGGCAATACG ATGAGTAATC TAGATGAAAC GACATACACC
AAGACGTTTT CGGTTTACGT CACAGATGCA AACGGAGTAG CGGTGGGTAA CCAAGTCATC
TCGCTTTCGG CAATACCTAT CGAATATTAC AAGGGTACTT TGGCAAACTG CGTGACTACA
ACAGTGGCTG GCGTCGCAAC AACAAAATGT GGAACTTGGG TTTATTCAGG TACTCCCACA
ACATGCGCCA ATGAAGACCT TAACCTAGAC GGCATTCTGA ACGCTGGTGA AGATACAAAC
AAAAACGGAC AATTGACACC GGGGAATATT GTGGTAGCCG CGCCAGGTAG TGTTACAACA
GACGTGTCAG GTCGGGCAAC TTTCGCCATA CAGTATGGTG AACAATTTGC TCCTTGGGCA
ACCATTGCTA TTACCGCACG AGCAACGGTT GCTGGTACTG AATCACGCCA GTCCATTTTG
TATGGTTTAG CAGGATTGGC TTCTGACTTC GAGGCGACGA CTCCCCCTGC TGGCGCAACG
AGTCCCTTTG GTTCCTCTAG TCTGTGCACT AATCCGAATT GA
|
|---|
| Protein sequence | MNCRKMDMKL LKFVVGLTVA MALTACGGGG GNPGTVSGGS LPVASAPAVG ATAATIEVLT
SANSLLSSGS EAVITAFVKN GSNVGLANQA VTFSASSGTL QVTTSTTDST GAVTAKLIAG
GDKSIRDITV AVTAGSVSGS VVVPVTGTRV SIAGSGSLQA GGAAAQYTIR AVDSSGNPIG
GATVAVSSAL GNAVSSSSLS TDSTGTAKFL YTPNKAGTDT LTVSGLGTNA SSTVIINAID
FVALSPSNDT AIAIGASQTI TVQYKLSGAG VAGQTVAFST TRGTFVTSTA TTDANGQASA
VLSSTTAGPA VVAAQIVGVG SVNLPVQFVA TTPATIVVQS NPGSVLPNSS GTTNQSTIEA
IVRDSNGNAV ANRQVNFTAV QDLSNGILSP GTATTDANGR AQVQFIPGAS STPADGVTIQ
ATVASTAITG TTSLTVNGKA LFITIAFGNT MSNLDETTYT KTFSVYVTDA NGVAVGNQVI
SLSAIPIEYY KGTLANCVTT TVAGVATTKC GTWVYSGTPT TCANEDLNLD GILNAGEDTN
KNGQLTPGNI VVAAPGSVTT DVSGRATFAI QYGEQFAPWA TIAITARATV AGTESRQSIL
YGLAGLASDF EATTPPAGAT SPFGSSSLCT NPN
|
|---|
| |