Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2912 |
Symbol | |
ID | 3963392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3222462 |
End bp | 3223454 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637917731 |
Product | peptidase M23B |
Protein accession | YP_524154 |
Protein GI | 89901683 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.471591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTGA TTATCACGGA TGCGTGGCTC GCCAAGAGTC GTGCGATACA CCTCAGTGGT ACCAAGCTGG TTCTGGCTGC GTTGCTGGCC TCATTGACCT TGATATTGCT GGCGGCGGGT GTCTACCACT ATGTGTTTTT GAAGGGTGCC AGGGAGGGGT GGCCCGTGGT CGGCAACTTG CTGCGCGTGG TCGTGAAGGA TGAGTTTGCC CAACGGGACC GGTTTATGCG TGAAAACCTG GATGCATTGG CGCGCAAGTT GGGCGAAATG CAGGCAAAAC TGAGGCAATT GGAGTCTTTG GGTGAGCGGG TCTCGGGCTT GGCAGGGGTT AACCCGCTCG AGATCAAGGC CCAGACGGGT CAAGGCGGCG CGCTCGTGTC GGGGCATTCA TTGTCGATGG ACGAGCTGCA GACGACGCTG GACGACCTGG CGCGCCTGAC CGATCAACGG ACCGATTTGC TGACGGTGCT GGAGTCGCGT TTGTTTGAGC AGAAAATTCG CAACATGATG GTGCCGACAC AGCCGCCGGT CATCACAGCG ACGGTAGGTT CTGCCTTTGG CTGGCGTCTG GACCCGCTGA CCGGCCGTAC GGCGCTGCAC ACCGGGCTGG ATTTCCCGGC CATTTCTGGA ACACCCATCG TCGCTGCTGC CGGTGGCGTG GTGGTAACGC AGGAGTTTCA TCCCGAATAC GGCAACATGA TTGAAATTGA TCACGGCAAT GACCTCATCA GCCGTTATGC CCATGCCTCC AAAGTACTGG TCAAGAAGGG CGACTTGATC AGGCGCGGGC AAAAGATTGC CGAGGTGGGT ACCACCGGCC GCTCCACGGG CGCGCATTTG CATTTTGAGG TGTTGGTGAT GGGCATTCCG CAGGACCCCC AGAAGTTTCT GGCGGCCGGG CAAAACCTGG CAACACCTCA ATTGGCCAAG CTGATGGCTG CTGCGCCAGC CCGGCCAAGC CGCCCAGAAA ATCGGTTGGC CGGTCAAAGG TAA
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Protein sequence | MQLIITDAWL AKSRAIHLSG TKLVLAALLA SLTLILLAAG VYHYVFLKGA REGWPVVGNL LRVVVKDEFA QRDRFMRENL DALARKLGEM QAKLRQLESL GERVSGLAGV NPLEIKAQTG QGGALVSGHS LSMDELQTTL DDLARLTDQR TDLLTVLESR LFEQKIRNMM VPTQPPVITA TVGSAFGWRL DPLTGRTALH TGLDFPAISG TPIVAAAGGV VVTQEFHPEY GNMIEIDHGN DLISRYAHAS KVLVKKGDLI RRGQKIAEVG TTGRSTGAHL HFEVLVMGIP QDPQKFLAAG QNLATPQLAK LMAAAPARPS RPENRLAGQR
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