| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2887 |
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| Symbol | |
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| ID | 3963101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3189636 |
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| End bp | 3191042 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917706 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_524129 |
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| Protein GI | 89901658 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC CCAACACCAC CAAGACAGCC ACCCCCGCTC AGCGCGACCC TGACAGGGGC
TTCAGTTACA GCCGTTCTTT TTTTGAGGGC TTGGTCGACA GCGCCCTGGC GCACGCCAAA
AAACTCGGCG CCAGCGACGC CGGGGCCGAA GCGTCCGAGG GCTGCGGGCT GAGCGTATCG
GTGCGCAAGG GGGAGCTGGA AAATGTGGAA CGTAACCGCG ACAAGTCGCT CGTCGTCACG
GTCTATTCGG GTCAGCGCCG GGGTAACGCC AGCACCTCTG ACTTTTCCCA CGTTGCGATC
GAGCAGACCG TGCAGGCTGC GTATGACATT GCACGCTTCA CGGCCGAAGA CCCGTTTGCG
GCCTTGCCCG ATGTGCAGGA CATTGCCCAG CCCTCAGAGC AGCGCACCGA CCTGGATTTG
TTCTTCCCGT GGGTGATCAA CAGCGAGCAG GCGGCGGCAA TCGCCATGGC TTGTGAGGCG
GCGGCGGTGC AAACCGACAA GCGCATCACC AACAGCGAGG GCGCGGCCGT GTCAGCGCAG
CAATCGCATT TTTTCAGCGC GCACACACAT GGCTTTCGGG GTGGTTATGC CAGTTCGCGC
CACTCCCTGT CGGTGTCGCC GATCGCGGGC AAGGGCAGCG GCATGCAGCG CGATGCCTGG
TACAGCTCTC AGCGCAACGC CGATGAGCTG GCCTCGCCCG AAGCCGTGGG CCGCTACGCC
GCCGCGCGCG CCTTGAGTCG TCTGAATTCG CGCAAGATTG CCACCACCGA GTGCCCGGTC
TTGTTTGAGT CGCCGCTGGC CGCTGGCCTG CTGGGCAGCT TTGTACAAGC CATCAGTGGC
GGCTCCCTGT ACCGCAAGAG CTCATTTCTG CTCGACTCGC TGGGCCAGCA GGTGCTGGCC
AAACACATTG ATATTCTGGA AGACCCGTTT GTCAAACGCG GCAAAGGCAG CTCGCCGTTT
GATGACGAGG GTGTCCGGGT CAAAGCGCGC CAGGTGGTGC AAGCCGGGCG GGTGCAGGGC
TATTTTCTGG GCAGCTACTC GGCCCGCAAG CTTGGCATGA AGACCACCGG CAATGCCGGG
GGTTCGCACA ACCTCATCTT GACGTCGCGC CTGACGCGCC CCGGTGATGA CCTGAACGCG
ATGCTCGAAA AACTGGGCAC CGGCTTGTTC GTGACCGAGT TGATGGGCAG CGGTGTGAAC
TACGTTACCG GCGACTACTC CCGCGGTGCC AGTGGCTTCT GGGTTGAGAA AGGCCGCATT
GCCTATCCGG TACACGAGAT CACCATCGCG GGCAACATGA GAGACATGCT CAAGGGGATC
ACTGCCGTGG GGGCCGACAC CTACAACTAC GGCGCCAAGA CCATCGGTTC GGTGCTGGTG
GACCGGATGA AGGTGGCAGG GAGTTGA
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| Protein sequence | MKKPNTTKTA TPAQRDPDRG FSYSRSFFEG LVDSALAHAK KLGASDAGAE ASEGCGLSVS
VRKGELENVE RNRDKSLVVT VYSGQRRGNA STSDFSHVAI EQTVQAAYDI ARFTAEDPFA
ALPDVQDIAQ PSEQRTDLDL FFPWVINSEQ AAAIAMACEA AAVQTDKRIT NSEGAAVSAQ
QSHFFSAHTH GFRGGYASSR HSLSVSPIAG KGSGMQRDAW YSSQRNADEL ASPEAVGRYA
AARALSRLNS RKIATTECPV LFESPLAAGL LGSFVQAISG GSLYRKSSFL LDSLGQQVLA
KHIDILEDPF VKRGKGSSPF DDEGVRVKAR QVVQAGRVQG YFLGSYSARK LGMKTTGNAG
GSHNLILTSR LTRPGDDLNA MLEKLGTGLF VTELMGSGVN YVTGDYSRGA SGFWVEKGRI
AYPVHEITIA GNMRDMLKGI TAVGADTYNY GAKTIGSVLV DRMKVAGS
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