Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2861 |
Symbol | |
ID | 3962386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3160047 |
End bp | 3160727 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637917680 |
Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
Protein accession | YP_524103 |
Protein GI | 89901632 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.518579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAAAAA CCCGAAAAAT CGCTGTTTTA CTCGCCGGCT GCGGCCACCT TGATGGCGCT GAGGTACGCG AGGCGGTGCT CACCCTGCTG GCGCTGGATC AGCATGGCGC GGCGTTTCAG TGCATCGCGC CCAACGCGCC GCAATTCCAT GTGATCAACC ACATCACCGG TGAGCCGGTG GCAGGTGCGC AGCGTAACAT TCTGGAAGAG TCCAGCCGCA TCGCCCGCCT GGGTCAGTGT CTGGATCTGG CCAAGGCCAA GGTGGCGGAC TACGACGCGC TGGTGATGCC GGGTGGCTAC GGTGTGGCCA AAAATAATTG CTCGTTTGCC TTCAAGGGCG CAGATGCCGA GGTGCGCCCT GACGTGGCGG CGTTTGTGCG TGGCTTTTTT GACGCCAAGA AGCCGGTGGG TGCCATCTGT ATTGCCCCTG CACTGGTGGC GCTGGCCTTG CATCAGGTGG ATGACAGCGC AACATTGACT TTGGGGAACG ATGCGGGTGT CGCCGCCGCC ATGGGTCAGC TCGGCCAACG GCATCAGAAC ACGCCCAACG CACGCGAGAT CGTGATTGAT GAGGCGCATA AACTCGTGAC CACCCCGGCC TACATGTTTG ACGATGCGCG CCTGAGCGAC GTGTTTGTCG GCATTGAGCG CTGCGTGGCC GAGGTGCTCA AGCGCATTTG A
|
Protein sequence | MAKTRKIAVL LAGCGHLDGA EVREAVLTLL ALDQHGAAFQ CIAPNAPQFH VINHITGEPV AGAQRNILEE SSRIARLGQC LDLAKAKVAD YDALVMPGGY GVAKNNCSFA FKGADAEVRP DVAAFVRGFF DAKKPVGAIC IAPALVALAL HQVDDSATLT LGNDAGVAAA MGQLGQRHQN TPNAREIVID EAHKLVTTPA YMFDDARLSD VFVGIERCVA EVLKRI
|
| |