| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2860 |
|---|
| Symbol | |
|---|
| ID | 3962385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3158784 |
|---|
| End bp | 3159893 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637917679 |
|---|
| Product | molybdate ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_524102 |
|---|
| Protein GI | 89901631 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4148] ABC-type molybdate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02142] molybdenum ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.522615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA GACCGGAGCA GGCGAGCAAA GACACATCGG GATTGACCTT GCAAGTGGCA
CTGCAACGCC AGGACTTTCG CCTGGAGATT GACCTTGAGC TGGCGGGTCA CGGCATCACG
GCCCTGTTTG GTCCGTCCGG CTCAGGCAAA ACCACCGCTT TGCGGGTACT CGCTGGTTTG
GAGCCCGCGG CGCAAGGCCG CGTCTGCGTG CAAGGTGACA TGTGGCAAGA CAGCGCGCAA
GGGGTCTTCA AACCGGTACA CCAGCGCGCC CTGGGCTATG TGTTTCAGGA GGCCAGCCTC
TTTGACCACC TCAATGTGCA AGAGAACTTG CAGTACGGCT TCAAGCGCAC GCCTGCATCA
GAACGTTTCA GAAACTGGGA TCACACCCTG GACCTGCTGG GCATTGCGCA CCTGCTCAAG
CGCTGGCCGC ACGAACTCTC TGGCGGCGAG CGTCAACGGG TGGCCATCGC CCGCGCGCTC
GCTGCGAGCC CGCGCCTGCT GCTGCTGGAC GAACCCATGG CCGCGTTGGA TGCGCCGCGC
AAGGCCGAGA TACTGCCCTA CTTGGAGCGG CTGCAAAGCA GGCTGGAGAT CCCGGTCATT
TACGTCACCC ATGCCATCGA TGAAGTAGCG CGTCTGGCCG ACCAGCTGGT GCTGCTGGAG
GCCGGCCAGG TCACGGCGCA CGGGCCGACG GCCGAACTGT TGACGCGGCT GGACCTGCCA
CTGGCGCACG GCGACAGCGC CGGGGCCGTG CTGCACTGCA GCGTGGTCTC CCATGATGAA
GCCGACCACC TCACCCTGAC CCGTTTTGCC GGTATTGATC TGGTGGTGCC GCGTCAAAAC
GCCGCCGTCG GCCAAACCTT GCGCGTGCGG GTGGCTGCGC GTGATGCCAG CCTGACCTTG
CAGCGCCAAA CCGACACCAG CATTTTGAAC ATCCTGCCCG CCTCGGTGCT TGCCCTGTCT
GCTGACGGCC CAGGCCAGGT GATGGTGGCG CTGGAAGTGG GCGGCAGCGC CCTGCTGGCA
CGCATCACGG CGCGTTCGGC GCACACGCTG GGGCTCGTGC CCGGCTTGGC GGTGTACGCC
CAGATCAAAG GTGTGGCGAT TTTGGGTTAG
|
|---|
| Protein sequence | MNTRPEQASK DTSGLTLQVA LQRQDFRLEI DLELAGHGIT ALFGPSGSGK TTALRVLAGL
EPAAQGRVCV QGDMWQDSAQ GVFKPVHQRA LGYVFQEASL FDHLNVQENL QYGFKRTPAS
ERFRNWDHTL DLLGIAHLLK RWPHELSGGE RQRVAIARAL AASPRLLLLD EPMAALDAPR
KAEILPYLER LQSRLEIPVI YVTHAIDEVA RLADQLVLLE AGQVTAHGPT AELLTRLDLP
LAHGDSAGAV LHCSVVSHDE ADHLTLTRFA GIDLVVPRQN AAVGQTLRVR VAARDASLTL
QRQTDTSILN ILPASVLALS ADGPGQVMVA LEVGGSALLA RITARSAHTL GLVPGLAVYA
QIKGVAILG
|
|---|
| |