Gene Rfer_2827 details

Gene Information

• Locus tag: Rfer_2827
• ID: 3960665
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 3127263
• End bp: 3127859
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637917647
• Product: 3'-5' exonuclease
• Protein accession: YP_524070
• Protein GI: 89901599

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0393048
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACACCC AACACGCCAC CCCCAGCAAA GAGCAGATTG CCTTGCTGCC AGAATTCGAC 
CGCCTGGAGC CCAGCCGCAT TGCGCTCGTG ACCACCGCCG CACAGGCGCA CGAGGCGCAT 
GCGGAACTCA GCGCCGCCAC GGTCTGGGGC TTCGATACCG AATCCAAACC CACGTTTTTC 
AAGGACCAGG TGTCCGATGG CCCGCACATC GTGCAGTTGG CCACGCTGGA CCAGGCCTGG 
GTGTTTCAGT TGCACGACCC GGCGTGCCGC GCCGTGGTGG CACACCTGCT GGCCCTGCCG 
GGTTTCACCA AGGCCGGCTT TGGCCTGGGC GACGATCGCA AGCGTATCCA GTCCAAGCTG 
GGCGTGGAGG TGGTGGGCAT GCTGGAGCTC AACACCGTGT TTCGCCAGCG CGGCTACCGC 
AAGGACATGG GTGTCAAAGG GGCAGTGGCG GTGCTGTTCA ACCAGCGTTT CATCAAGTCG 
AAGAAGGCGA CCACGTCCAA CTGGGCCTTG CCTAGCCTGA GCCAGGCCCA ACTGGTGTAC 
GCCGCCAACG ATGCCTATGC CGCCGTTCGT GTTTTCCACG CGCTGGGGCT CGCCTGA 

 

Protein sequence

MHTQHATPSK EQIALLPEFD RLEPSRIALV TTAAQAHEAH AELSAATVWG FDTESKPTFF 
KDQVSDGPHI VQLATLDQAW VFQLHDPACR AVVAHLLALP GFTKAGFGLG DDRKRIQSKL 
GVEVVGMLEL NTVFRQRGYR KDMGVKGAVA VLFNQRFIKS KKATTSNWAL PSLSQAQLVY 
AANDAYAAVR VFHALGLA