Gene Rfer_2806 details

Gene Information

• Locus tag: Rfer_2806
• ID: 3964256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 3104655
• End bp: 3105302
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637917624
• Product: GntR family transcriptional regulator
• Protein accession: YP_524049
• Protein GI: 89901578
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.155753
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGCAC TTTCGCTTTC TCCCCGCGCA CTCTATGAAG AGGTGGCTGA GCTCCTGCGT 
CAGCGCATTT TCGCGCGTGA ACTGGCGCCC GGGAGCTGGA TTGACGAGCT GAAGATTGCC 
GAAGCCTATG GCATCAGCCG CACGCCGCTG CGTGAAGCGC TCAAAGTGCT GGCGGCCGAA 
GGCCTGGTCA CCATGAAAGT GCGCCGTGGT GCTTATGTGA CCGAGGTGTC CGAGCGCGAC 
TTGTCAGATG TGTACCACCT GCTCAGCCTG CTGGAGTCTG ATGGTGCTGG CGTGGTGGCA 
GCAACGGCCA CGGCACCCCA GATCGAAGAG CTGCAGGCGC TGCACCTTGA ACTGGAAGCA 
GCTGCCGCCC CGGACCGGCA AGACCGGGAA CTCTTTTTTG AGATCAACGA ACGCTTTCAC 
ATGCGCTTGC TGGAGATTGC CAACAACCGC TGGCGCGACC AGATGGTGGC CGATCTGCGC 
AAGGTGATGA AGCTCAACCG CCACAACTCG CTGCTGAAAT CAGGGCGCAT CGAGGAATCA 
TTGAATGAAC ACCGCGCCCT GATGGCGGCC ATTGCGGCCC GGGACGCGGC ACTGTCCGTG 
CGGCGGATGC AGGAACACTT CAAGAACGGG CTGGAAGCCG CCAACTGA 

 

Protein sequence

MSALSLSPRA LYEEVAELLR QRIFARELAP GSWIDELKIA EAYGISRTPL REALKVLAAE 
GLVTMKVRRG AYVTEVSERD LSDVYHLLSL LESDGAGVVA ATATAPQIEE LQALHLELEA 
AAAPDRQDRE LFFEINERFH MRLLEIANNR WRDQMVADLR KVMKLNRHNS LLKSGRIEES 
LNEHRALMAA IAARDAALSV RRMQEHFKNG LEAAN