Gene Rfer_2800 details

Gene Information

• Locus tag: Rfer_2800
• ID: 3961406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 3094754
• End bp: 3096580
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637917618
• Product: 4Fe-4S ferredoxin, iron-sulfur binding
• Protein accession: YP_524043
• Protein GI: 89901572
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.563471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAAGCTA CCAACCTGGG CAATCCGGCT TATTTTCACA AAGTCGTTGA TTGTCAATGG 
GCCTGCCCGG CCCACACCCC CGTTCCTGAA TATATTCGTC TGATTGGTCA AGGGCGTTAC 
ACCGACGCCT ACATGATCAA CTGGGTGTCC AACGTATTTC CAGGCATTCT CGGTCGCACC 
TGCGACCGTC CCTGTGAGCC CGCCTGTCGT CGCGGACGCG TCGAGGAAAA CAATGGCGAG 
AAGCCCGAGC CGGTGGCGAT TTGTCGCCTC AAACGCGTGG CCGCCGATAA CAAGGACTCT 
GTCTTGGCGC GTATGCCGCA GGTGGCGCCG TCCAATGGCA AGCGCATCGC CTGTGTTGGT 
GCCGGGCCAG CGTCATTGAC GGTGGCACGT GACCTGGTAC CTTTGGGTTA CGAAGTGACC 
GTGTTTGAAG GCGAAGCCAA GGCCGGCGGC TTTATGCGCA CCCAGATTCC GCATTTCAGG 
CTACCCGAAT CGGTCATTGA TGAAGAGACA GGATACATCC TCGATCTGGG GGTGAAGTTC 
AAGAACAATC AACGCGTTGA CTCGATGAAA GAGTTGATGA CGCAGGGCTA CGACGCTGTG 
TTTGTTGGCT GTGGCGCTCC TCGGGGACGT GTGCTGGATT TGCCCGGGCA TAAACAAGCC 
GAGGCCGGTA TTCACATTGG CATTGACTGG CTGGCGTCCG TCTCCTTTGG CCACGTCACC 
AGCGTCGGAC CGCGTGTCAT TGTGCTGGGT GGCGGCAACA CAGCGATGGA CTGCTGCCGC 
TCCGCTCGGC GCCTGGGTGG CTCCGATGTC AAAGTGATCG TGCGCAGCGG CTTCGAAGAG 
ATGAAGGCCT CGCCCTGGGA GAAGGAAGAC GCGCAACACG AAGGCATTCC AATCATTAAC 
TTTCATGTCC CGAAGAGTTT CAACCATAAG GACGGCAAGC TCACGGGCAT GACCTTTGAG 
GTGGTGAGCG CGGTGTATGA CGACAAGGGT CGGCGTACCT TGGTGCCCAC GGGCGAGCCC 
GATGTGGTTT TTGAGTGCGA CACCGTGCTG GTGGCCGTCG GTCAGGAAAA CGCTTTTCCC 
TGGATTGAGC GTGACACTGG CATTGAGTTT GACAAGTGGG GCTTGCCGGT GCTGGGTAAA 
GATACTTTTC AATCGTCTGT TCCCCGGGTG TTCTTTGGCG GCGACGCCGC GTATGGACCC 
AAAAACATCA TTACGGCCGT GGCGCATGGT CATGAGGCCG CGGTGTCGAT TGACCGGTTT 
CTCAATGGCG AAGCGGTGGA GGTTCGCCCG GCACCACGCA CTAACCTGAT GTCCCAGAAG 
ATGGGTATTC ACGAGTGGAG CTACCACAAC GATGTATCGG TCGACAAGCG CTTTGTAGTG 
CCCTGGGCCA AGGCCGAGGT GGCATTGGCG AGCATCCGCG TCGAAGTGGA ACTGGGTTTT 
GATGCCGCCA CCGCCTTCAA GGAAGCCAGC CGCTGCCTGA ACTGTGACGT GCAGACCGTG 
TTCAACCGTG ACACCTGCAT CGAGTGCGAC GCCTGTGTCG ATATCTGTCC GATGGATTGC 
ATCACCTTCA CCAGCAATGG TGAAGAGGCC GATTTGCGCA CCCGGCTGAA AGCCCCGGCG 
CACCACACGG CGCAAGACCT GTATGTTTCG AGCGAACTCA AGACCGGGCG TGTCATGGTC 
AAGGATGAAG ACGTGTGCTT GCACTGCGGT TTGTGTGCCG AGCGTTGCCC GACGGGCGCT 
TGGGATATGC AGAAATTCTT GCTGAACACG ACCCAGGCTG GGCCCGGGTG TCGTGACAGC 
CGCAAAGTTC AAACGGAGGC CGCATGA 

 

Protein sequence

MQATNLGNPA YFHKVVDCQW ACPAHTPVPE YIRLIGQGRY TDAYMINWVS NVFPGILGRT 
CDRPCEPACR RGRVEENNGE KPEPVAICRL KRVAADNKDS VLARMPQVAP SNGKRIACVG 
AGPASLTVAR DLVPLGYEVT VFEGEAKAGG FMRTQIPHFR LPESVIDEET GYILDLGVKF 
KNNQRVDSMK ELMTQGYDAV FVGCGAPRGR VLDLPGHKQA EAGIHIGIDW LASVSFGHVT 
SVGPRVIVLG GGNTAMDCCR SARRLGGSDV KVIVRSGFEE MKASPWEKED AQHEGIPIIN 
FHVPKSFNHK DGKLTGMTFE VVSAVYDDKG RRTLVPTGEP DVVFECDTVL VAVGQENAFP 
WIERDTGIEF DKWGLPVLGK DTFQSSVPRV FFGGDAAYGP KNIITAVAHG HEAAVSIDRF 
LNGEAVEVRP APRTNLMSQK MGIHEWSYHN DVSVDKRFVV PWAKAEVALA SIRVEVELGF 
DAATAFKEAS RCLNCDVQTV FNRDTCIECD ACVDICPMDC ITFTSNGEEA DLRTRLKAPA 
HHTAQDLYVS SELKTGRVMV KDEDVCLHCG LCAERCPTGA WDMQKFLLNT TQAGPGCRDS 
RKVQTEAA