Gene Rfer_2799 details

Gene Information

• Locus tag: Rfer_2799
• ID: 3961405
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 3092913
• End bp: 3094757
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637917617
• Product: pyruvate flavodoxin/ferredoxin oxidoreductase-like
• Protein accession: YP_524042
• Protein GI: 89901571
• COG category: [C] Energy production and conversion
• COG ID: [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.659635
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGCA TTGAAGCCAT TAACGATTTC GTCATTAAAT TTGCCAATAT CAACGGCTCC 
GGTTCGGCTT CGGCCAATGA ACTGTTTGCC AAGGCTGTGA TGCGCATGGG GGTGCCGGTG 
AGTCCGCGCA ACATCTTCCC CAGCAACATT CAAGGCATGC CGACCTGGTA CGAGGCGCGG 
GTTTGCGAAA AGGGTTACCA CGGACGCCGC GGTGGCGTTG ACATGATGGT CGCCATGAAT 
CCCCAGACCT GGGACGCGGA CGTGGCCGAA ATCGAGCCCG GTGGTTATCT TTTTTACGAT 
AGCACGCGCC CCATCCCTGA ATCCAAGTTT CGCAAGGATG TGCAAGTCAT CGGCGTGCCA 
CTGACCGAAA TCAGCAACGC GGCGTATACC GATCCCCGGC AACGTCAGTT GTTCAAGAAC 
ATCATTTACG TCGGCGCGCT GTCTGTGCTG CTCGATGTTG ATGCCAGTGT TTTTGAAAAG 
CTCTTTGCCG AGCAGTTCAA GGGCAAGGAG CGACTGCTTG AGTCCAATGT GCGCGCGATC 
CATCTGGGGC GTGACTACGT CAAGCAGCAT ATTGAAGCCC CATTGGGCAT CCGGGTGCGT 
CGATCCGACA AGGTGGGCGA CCAGATATTT ACGGATGGCA ACAGCGCGCT TGCTTTGGGC 
TGCGTCTATG GTGGTGCCAC GGTGGCAGCC TGGTACCCGA TTACACCGTC GTCCTCGGTG 
CCCGAGGCAT TTCAGAAGTA TTGCGACAAG TTCCGGGTCG ATCCTGAAAC CGGTCAACTC 
AATTACGCCA TCGTGCAAGC CGAAGACGAA TTGGCCTCTA TTGGCATGGC CATTGGCGCT 
GGCTGGAATG GCGCGCGGTC CTTTACCGCC ACCTCCGGCG CTGGCATATC GCTGATGACC 
GAGTTCCTTG GGCTGGCCTA CTTTGCCGAA ATTCCGGTCA CCTTGATCAA TGTGCAGCGC 
GGCGGGCCGT CCACCGGCAT GCCCACGCGC ACGCAGCAGT CTGATTTGCT GGCTTGCGCC 
TACGCTTCAC ATGGCGACAC CAAGCATGTG ATGCTTTTCC CGCAAGACCC GCATGAGTGT 
TTTGAGCATG CGGCGGCGGC GCTGGATCTG GCTGATCGTC TGCAAACGCC GATCTTTGTC 
ATGTCCGATC TGGACATTGG CATGAATCAG CGCTTGTGCA AGCCTTTCGT CTGGGACGAT 
GCGCGTGAAT ACGATCGCGG CAAGGTCATG ACGGCCGAGG AACTCGAAGC CGGCAAGGAT 
TTTGGTCGTT ACAAAGATGT GGACGGCGAT GGCATTCCCT GGCGCACGCT GCCGGGTACG 
CATCCGAGCA AGGGTGCTTA CTTTACGCGC GGCACCTCCA AGGACGCCTA TGCCCGCTAC 
TCCGAGCGCG GGCCAGATTA CGTCTACAAC ATGGAACGTC TGCTCAAGAA GTTCAAAACC 
GCCGCCGATC TCGTGCCGCA ACCGCTGCTG CGCAAGGCCC AGCAAGCCAC GCGCTTCGGT 
GTGATCTATT TTGGCTCAAC CAGCCCGGCC ATGCGCGAAG CCCTGGATGT GCTCGAAGAG 
CAGGGCGTGC ATCTGGATGC GATGCGGCTC CTGGCGTTCC CGTTCCCGGC GTCGGTTGAT 
CGGTTCATCG CGGAGCATGA CAAGGTGTTT GTCGTCGAGC AAAACCGTGA TGCGCAAATG 
CGCTCCCTGC TGGTCAATGA ACTGGAGGTT GATCCGAAGC GTCTGGTCAA GGTGCTGCAC 
TACGACGGCA CCCCCATCAC GGCACGCTTC ATCACCCAGG CCATCAGCAA GAATTTGAAT 
GCGCTGGTTT CTTCCACCAC TTCCCTGCAA AAGGAGGCCG CATGA 

 

Protein sequence

MKRIEAINDF VIKFANINGS GSASANELFA KAVMRMGVPV SPRNIFPSNI QGMPTWYEAR 
VCEKGYHGRR GGVDMMVAMN PQTWDADVAE IEPGGYLFYD STRPIPESKF RKDVQVIGVP 
LTEISNAAYT DPRQRQLFKN IIYVGALSVL LDVDASVFEK LFAEQFKGKE RLLESNVRAI 
HLGRDYVKQH IEAPLGIRVR RSDKVGDQIF TDGNSALALG CVYGGATVAA WYPITPSSSV 
PEAFQKYCDK FRVDPETGQL NYAIVQAEDE LASIGMAIGA GWNGARSFTA TSGAGISLMT 
EFLGLAYFAE IPVTLINVQR GGPSTGMPTR TQQSDLLACA YASHGDTKHV MLFPQDPHEC 
FEHAAAALDL ADRLQTPIFV MSDLDIGMNQ RLCKPFVWDD AREYDRGKVM TAEELEAGKD 
FGRYKDVDGD GIPWRTLPGT HPSKGAYFTR GTSKDAYARY SERGPDYVYN MERLLKKFKT 
AADLVPQPLL RKAQQATRFG VIYFGSTSPA MREALDVLEE QGVHLDAMRL LAFPFPASVD 
RFIAEHDKVF VVEQNRDAQM RSLLVNELEV DPKRLVKVLH YDGTPITARF ITQAISKNLN 
ALVSSTTSLQ KEAA