Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2779 |
Symbol | |
ID | 3961327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3066610 |
End bp | 3067662 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917597 |
Product | sigma-70 region 2 |
Protein accession | YP_524022 |
Protein GI | 89901551 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.068719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA GCCCCGTGCC TGGCCCTGAC AACGCTCCCA GACTGCCGAC ACGCGGCGTG TCGGATTTTG TGACAAATAG CCATCCAGCC CCCGTTGATG GTGGAGAGTA TGCTGCTGAT TCAGTAGTAA AACACGGGCT GTCGGAACAC GCATCGCCGG CGCTGCCGGG TGCGGGCCTT GAGGCACTTG ACGCGGCGGG CGAGTCCGGT GACGCGCTGA CCGTTTACCT GCGCCAGGTG CGCCGCACCA CCCTGTTCAC GCCGCAGGAA GAGTTCGAAC TTGCCGGCAG GGCCCGCGCT GGCGACTTTG CCGCCCGCCA AAGCATGATT GAACACAATC TGCGCCTGGT GGTGAGTATT GCCAAGGCCT ATATGGGCCG TGGCGTGCCC TTGTTGGACC TGATCGAAGA AGGCAACCTG GGTCTGATGC ACGCCATTGA TAAATTTGAG CCGGAGCGGG GATTTCGCTT TTCCACCTAT GCCACTTGGT GGATTCGCCA ATCGGTGGAT CGTGCCTTGA TGTGCCAAGG ACGGGTGGTG CGCCTGCCGG TGAACGTGGT CAGGGAGTTG CAGCAGGTCC TGCGGGCACG CCGGGCGCTG GAGAGTGATG CGGCGTTCGT GGTGAGTCGA CCCGATGGCA TTCGAGTCGA AGATGTGGCC GCCTTGTTGG GCCGCGACCC GGTCCATGTT GCCGATTTGC TGGGCCTGGC GGAGGCGCCC AGGTCCCTGG ACGCCGCCCT GGACCGCTCG GGCGAGACTC AGACATTCGG GGATTCACTG GTCGATGAAA TCACGGCGGA CCCGTCTGGT GTGACGCAGG TCCACGAGGT GGAGCGTTTG CTGGAGGAGT GGGTTGGTAC CTTGTCAGAA CGCGAAAAAG AGGTGCTGGA GGGGCGCTTT GGCTTGCATG ACCGCGAGCC TGAAACGCTG GATGTGCTCA GCGCGCGTCT GGACCTGACG CGTGAGCGCG TGCGACAGGT CCAGAACGAG GCTTTGGCCA AGCTCAAACG CTATCTGGCG CACCGCGGTA TCACACGGGA CGCCCTGATT TAG
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Protein sequence | MKKSPVPGPD NAPRLPTRGV SDFVTNSHPA PVDGGEYAAD SVVKHGLSEH ASPALPGAGL EALDAAGESG DALTVYLRQV RRTTLFTPQE EFELAGRARA GDFAARQSMI EHNLRLVVSI AKAYMGRGVP LLDLIEEGNL GLMHAIDKFE PERGFRFSTY ATWWIRQSVD RALMCQGRVV RLPVNVVREL QQVLRARRAL ESDAAFVVSR PDGIRVEDVA ALLGRDPVHV ADLLGLAEAP RSLDAALDRS GETQTFGDSL VDEITADPSG VTQVHEVERL LEEWVGTLSE REKEVLEGRF GLHDREPETL DVLSARLDLT RERVRQVQNE ALAKLKRYLA HRGITRDALI
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