Gene Rfer_2770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2770 
Symbol 
ID3961318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3058397 
End bp3059515 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content57% 
IMG OID637917588 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_524013 
Protein GI89901542 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.534579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGTG TCGCCATCAG TAGCACCGGA CTCTATATTC CACCGCACGT CATTACCAAC 
GAAGAGTTGG TGGCCTCCTT CAATTGTTTT GCAGCGCAGG AAAACAAGGA ACATGCTGCT
GCCATCGCCG CCGGAACCCG CCAGCCAATT CCCCAGTCCA GCATTGAGTT CATTGAGAAA
GCGTCTGGCA TCAAGCAACG CTATGTGATG GAAAAATCCG GCATTCTTGA CCCGCAGCGC
ATGCGCCCGC GCTTGCAGGT CCGCCCTGAT AGCGAGATTT CGTTAATGGC TGAAATTGGT
GTGGCCGCAG CGCGCGACGC GCTGGCCCGC GCCGGTAGAC AGCCCGAAGA TATTGACGGC
GTGATTTGTG CTTGCGCCAA TATGCAGCGT GCTTACCCGG CCATGGCGGT GGAAATTCAG
ACTGCGTTGG GCATTCAGGG CTTCGGCTTC GACATGAATG TGGCTTGTTC ATCTGCCACT
TTTGCCATTG AGATGGCGGT CAACGCAGTC AAAACTGGCT CGGCCCGGGC CATTTTGGTG
GTGGACCCGG AGATTACTTC ATCGCATCTG GCCTGGAAGG ACCGCGACTG CCATTTCATT
TTTGGTGACG TCTGCACCGC CATCCTGATC GAGCGGCTGG AGAATGCCCC TGCGGGTGCC
TTTGAAGTGC TGGGCACCCG CTTGCTCACC ACGTTTTCCA ACAATATCCG CAACAATGCC
GGCTATATGT GGCGCAGCGA GGACCGCAAC CCCGATGACC GTGATCTGCT TTTCTACCAA
GAGGGGCGCA AGGTCTTCAA GGAAGTTTGT CCGATGGCGG TGGAGCACAT CACCAGCCAC
CTGGCGGCAC TTGGCCTGGC GCCCGATGCG GTGCGTCGTT TTTGGCTGCA TCAGGCCAAC
CTGGCCATGA ACCAGTTGAT TAGCCGCAGA TTGTTGGGGC GCGATGCGAC GCCGGATGAC
GCGCCGGTGA TCCTGAATGA ATTTGCCAAC ACCGCCTCAG CCGGTTCGAT CATTGCCTTT
CACCGGCACC ATGACGACAT CCAGGCTGGC GATGTAGGGG TGATCTGCTC TTTTGGAGCC
GGCTATTCGA TTGGCAGTGT GGTGTTACGC CGCACTTGA
 
Protein sequence
MHRVAISSTG LYIPPHVITN EELVASFNCF AAQENKEHAA AIAAGTRQPI PQSSIEFIEK 
ASGIKQRYVM EKSGILDPQR MRPRLQVRPD SEISLMAEIG VAAARDALAR AGRQPEDIDG
VICACANMQR AYPAMAVEIQ TALGIQGFGF DMNVACSSAT FAIEMAVNAV KTGSARAILV
VDPEITSSHL AWKDRDCHFI FGDVCTAILI ERLENAPAGA FEVLGTRLLT TFSNNIRNNA
GYMWRSEDRN PDDRDLLFYQ EGRKVFKEVC PMAVEHITSH LAALGLAPDA VRRFWLHQAN
LAMNQLISRR LLGRDATPDD APVILNEFAN TASAGSIIAF HRHHDDIQAG DVGVICSFGA
GYSIGSVVLR RT