| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2765 |
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| Symbol | |
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| ID | 3961313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3053535 |
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| End bp | 3054182 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917583 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_524008 |
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| Protein GI | 89901537 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.416224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCTG ATGAGCTGAA GGTCATTTAT GCCGATAAGT CCCTGCTGGT GCTGGACAAA
CCGACTGGTT TGTTGTCTGT GCCCGGACGG GGCGAGGACA AGCAGGATTG CCTCAGTGCG
CGTGCCCAGC GCCTGTACCC GGATGCACTG GTGGTACATC GCCTGGATAT GGCTACCTCG
GGCTTGATGG TGATGGCCCG TGGCGCGGCT GCACAGCGCG CCCTGAGTCT GGCTTTTGCC
AGCCGCAGCG TCAGAAAACG CTACGTCGCT ATCGTCGACG GGCAACTGGC GCCATCGCTG
CAAGACTGGG GTGTGATTGA CCTGCCCATC ATCGTGGACT GGCCCGAGCG GCCGCGCCGG
ATCATTGATC ACCAGCGCGG CAAGCCCAGC GTGACGTACT GGCGCGTGCT GGCACACAAC
ACATCTGATG AAACGACCCG GGTCGAGCTG GAACCCGTGA CCGGCAGGTC GCACCAGTTG
CGTGTGCATT TGCTGGCATT GGGGCACGCC ATTGTGGGAG ATGCGTTGTA CGGCAGTCCG
CGCGTGCAAG CCATGGCTGA TCGACTGCTC TTGCATGCCT GCTTACTTGA ACTGCGCCAC
CCCGTGAGTG GGCAATCCAT GTGCTTTGAT AGTACGGAAG ATTTTTGA
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| Protein sequence | MHADELKVIY ADKSLLVLDK PTGLLSVPGR GEDKQDCLSA RAQRLYPDAL VVHRLDMATS
GLMVMARGAA AQRALSLAFA SRSVRKRYVA IVDGQLAPSL QDWGVIDLPI IVDWPERPRR
IIDHQRGKPS VTYWRVLAHN TSDETTRVEL EPVTGRSHQL RVHLLALGHA IVGDALYGSP
RVQAMADRLL LHACLLELRH PVSGQSMCFD STEDF
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