| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2761 |
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| Symbol | |
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| ID | 3963125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3049966 |
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| End bp | 3051219 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637917579 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_524004 |
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| Protein GI | 89901533 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0660078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCAGC ACATCAAGGT TCCCTCAGAA GGCCAAAAGA TCACTGTCAA TGCCGATATG
TCGTTAAACG TTCCCGATCA GCCGATCATT CCTTTTATTG AAGGTGACGG CACCGGGTTG
GACATCACAC CGGTGATGAT TAAAGTGGTG GATGCGGCGG TGACCAGGGC GTACGGTAGC
AAGAAGAAGA TTCACTGGAT GGAAGTTTAT GCTGGTGAAA AGGCAACCAA GGTCTATGGT
CCCGATGTCT GGTTCCCAAC TGAAACGCTG GACGCTTTGC GTGACTATGT GGTGTCCATC
AAAGGCCCAC TGACAACCCC AATCGGTGGC GGTATTCGCT CGCTCAATGT CTTTATGCGT
CAGGAGCTTG ACCTGTTTGT CTGCCTGCGT CCGATTCAGT ATTTTGAAGG CGTACCCAGC
CCCGTCAAAG AGCCGGAAAA AACCAATATG GTGATCTTCC GTGAAAACAC CGAAGACATC
TACTGCGGCA TCGAATTTGA AGCCGAATCG CCCAAGGCAA AAAAACTCAT CAAGTTCCTG
CAGGATGAGC TGGGTGTCAC CAAAATCCGC TTTCCCAATA CGTCGGGCAT CGGCATCAAA
CCGGTATCAC GTGAGGGTAC CGAGCGCTTG GTGCGTAAGG CGATCCGGTA CGCCATTGAC
AATGACAAAC CTAATGTCAC GCTGGTGCAT AAGGGCAACA TCATGAAATT TACCGAAGGT
GCTTTCCGTG ACTGGGGTTA TGCCTTGGCG CAGAATGAGT TTGGTGCCGA ACTTATTGAC
GGCGGACCCT GGTGCAAATT CAAGAGCCCC AAAACGGGCA AAGAGATCAT CGTGAAAGAC
TGCATTGCGG ATGCCTTCCT GCAACAAATT CTGTTGCGCC CGGCTGAATA CAGTGTGATA
GCGACCTTGA ACCTGAATGG GGACTACATT TCTGACGCAT TGGCGGCTCA AGTGGGCGGC
ATCGGCATTG CGGCCGGGGC CAACCTGTCA GACTCGGTCG CTTGCTTTGA AGCCACCCAT
GGCACAGCCC CCAAATATGC TGGAAAAGAT TATGTGAATC CAGGCTCTGA AATTCTGTCG
GCTGAAATGA TGCTACGCCA CATGGGCTGG TTTGAAGCTG CCGATGCCGT CATCAAGTCG
ATGGAACGCT CTATCAAGAG CAAGAAAGTC ACGTACGATT TCGCTCGTCT GATGGACGGT
GCGACCCAGG TCAGTTGCTC TGGATTTGGT CAGGTGATGA TCGACAATAT GTAG
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| Protein sequence | MYQHIKVPSE GQKITVNADM SLNVPDQPII PFIEGDGTGL DITPVMIKVV DAAVTRAYGS
KKKIHWMEVY AGEKATKVYG PDVWFPTETL DALRDYVVSI KGPLTTPIGG GIRSLNVFMR
QELDLFVCLR PIQYFEGVPS PVKEPEKTNM VIFRENTEDI YCGIEFEAES PKAKKLIKFL
QDELGVTKIR FPNTSGIGIK PVSREGTERL VRKAIRYAID NDKPNVTLVH KGNIMKFTEG
AFRDWGYALA QNEFGAELID GGPWCKFKSP KTGKEIIVKD CIADAFLQQI LLRPAEYSVI
ATLNLNGDYI SDALAAQVGG IGIAAGANLS DSVACFEATH GTAPKYAGKD YVNPGSEILS
AEMMLRHMGW FEAADAVIKS MERSIKSKKV TYDFARLMDG ATQVSCSGFG QVMIDNM
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