| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2754 |
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| Symbol | |
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| ID | 3963118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3040935 |
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| End bp | 3043094 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917572 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_523997 |
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| Protein GI | 89901526 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0121317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA TCCAATACGA ATTACAAGAC GGCGTTGCCA CCATCACCTT TAACGAACCC
AATTCCCCCG TCAACACCAT GTGCCTGCAA TGGCAGCAAG ACATGTCGGC CCTCGTTGCG
CAGGTTCTGA AGGACCAGGA CGCCATCAAA GGCATCATCC TGACATCGGC CAAATCCACT
TTTTTTGCCG GGGCTGACCT GAAGGGCGCG ATGCGCCTGC GGCCGTCCGA CGCGGGCGCC
ATCTTCACCG AGATCGAGCT GGTCAAGAAG AATTTCCGCA CCCTGGAGAC CTTGGGCAAA
CCGGTGGTGA GCTGCCTCAA CGGCACGGCC TTGGGCGGCG GCTGGGAAGT GGCCCTGGTC
GGCCACTACC GCATTGCCGT TGACGATCGC AAAACCCAGT TCGGCTTGCC CGAAGTGACG
CTGGGCTTGT TGCCTGGCGC CAGTGGCGTC ACCAAGATGA CGCGCCACCT CGGTTTGATG
GGTGCACAAC CCTACTTGGT GGAAGGCAAG ACTTTCTCGC CCAAGGAAGC AAAAAGTCTG
GGACTGGTGC ATGAGCTGGT CGCACCGGGC GACACAGCCG CCACCGAGAT GCGCACCAAG
GCACTGGCCT GGATTGCCGC CAACCCCAGC GCCCAGCACC CCTGGGAAGC CAAAGGCTAC
AAGGTGCCCG GCGGCCTGCC CTCCAGCCCG GCTGTAGCCC AAATGCTGGT GGTGGCTCCC
GCCATGATCA AGCAGCAAAC GCGCGGCCTG TACCCGGCAC CGGAGGCCAT CATGGCGTGC
ATGGTGGAAG GGCTGCAAGT CGATATCCCG ACCGCACTGC GCATCGAGAG CCGCTACTTG
GCCAAGCTCA TGACCGGCAT CAACGCCCGC GCCATGATCA ATACCTTTTT CTTCAACCTG
AACGCCATCA AGAGCGGCCA GTCGCGACCT TCTCAGTCCC CGCGCTTCAA ACCGGCCAAG
GTGGGTTTGC TGGGTGCCGG GATGATGGGT GCGGGCATTG CCTTCGCCCA GGCCAGCAAA
GGCATCGCCA CCGTGCTCAA GGATGTGAGT CAAGAAAAAG CCGATCTGGG CAAGTCTTAC
AGCGCCCGGA TCACCCAGGC GCGCGTGGAC AAAGGCCGCA TGAGCGCAAC CGACCAGCAA
ACCATTCTTG AGCGCATTCA CGCCACCGAC CAAGTGGCGG ATCTGGCGGG TTGTGACCTG
ATCATCGAGG CGGTGTTTGA AAACCGGGAG CTCAAGGCCA AGGTCACCCA AGAAGCCGAG
CCCATGCTGG CGCCCGGTGG CTTCTTTGCG TCGAACACCT CCACGCTGCC CATCAGCGGC
CTGGCCAAGG CCAGTGCGGC TGCAGACAAA TTTATCGGCA TTCATTTCTT CAGCCCGGTG
GACAAGATGA AGCTGGTCGA AATCATTCGT GGCCGGCAAA CCAGTGAAGA CACAGTGGCG
CGGGCTTATG ACTACGTGCA GGCCATCGGC AAAATGCCCA TTGTGGTGAA CGATTCGCGT
GGCTTCTTTA CCAGCCGTGT GTTTGGCACC TTTGTCATGG AAGGCGTGGC CATGCTGGGT
GAAGGCATTC CGGCGGCAGC CATCGAAAAT GCGGGCATTC AGTGTGGCAT GCCGGTCGGA
CCGCTGGCGG TTTTGGATGA AACCTCACTG ACGCTGAGTC TGCATGTGAT GGAGCAAACC
CGCGCCGACT TCGAAGCCGA GGGCAAGACT TATGTGGCCA GCCCAGGCGA GGCGCTGCTG
GTCAACCTGG TGAAGGAGCA CCAGCGGCCC GGCCGCGCGG GGGGCGCCGG CTTCTACGAA
TACCCCGCTG AGAGAGGCGT CAAAAAATTC CTCTGGCCGC AACTCAAACC GCTGTTTGAA
AAAGCCGATG TTCAGTGGGA CATCACCGAC CTGAAAGACC GCCTGCTTTA TCGTCAGGCG
GTGGAGACGG CGCGCTGTTT GAGCGAAAAC GTGCTCACCA GCGTACATGA CGCCAACATC
GGCTCCATCT TCGGCATTGG GTTCCCGGCC TGGACCGGTG GTGCCATGCA GTTCATCTAT
GGCATGGGGA TGGACGCCTT TGTGACGCGG GCAGACGCGC TGGCAGCCCG GTTCGGGGCC
GGTTTTGCGC TGACGGACGA AGTCAAGGCA GCAATCACAC GCTACCAGCC TGTTTATTGA
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| Protein sequence | MKTIQYELQD GVATITFNEP NSPVNTMCLQ WQQDMSALVA QVLKDQDAIK GIILTSAKST
FFAGADLKGA MRLRPSDAGA IFTEIELVKK NFRTLETLGK PVVSCLNGTA LGGGWEVALV
GHYRIAVDDR KTQFGLPEVT LGLLPGASGV TKMTRHLGLM GAQPYLVEGK TFSPKEAKSL
GLVHELVAPG DTAATEMRTK ALAWIAANPS AQHPWEAKGY KVPGGLPSSP AVAQMLVVAP
AMIKQQTRGL YPAPEAIMAC MVEGLQVDIP TALRIESRYL AKLMTGINAR AMINTFFFNL
NAIKSGQSRP SQSPRFKPAK VGLLGAGMMG AGIAFAQASK GIATVLKDVS QEKADLGKSY
SARITQARVD KGRMSATDQQ TILERIHATD QVADLAGCDL IIEAVFENRE LKAKVTQEAE
PMLAPGGFFA SNTSTLPISG LAKASAAADK FIGIHFFSPV DKMKLVEIIR GRQTSEDTVA
RAYDYVQAIG KMPIVVNDSR GFFTSRVFGT FVMEGVAMLG EGIPAAAIEN AGIQCGMPVG
PLAVLDETSL TLSLHVMEQT RADFEAEGKT YVASPGEALL VNLVKEHQRP GRAGGAGFYE
YPAERGVKKF LWPQLKPLFE KADVQWDITD LKDRLLYRQA VETARCLSEN VLTSVHDANI
GSIFGIGFPA WTGGAMQFIY GMGMDAFVTR ADALAARFGA GFALTDEVKA AITRYQPVY
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