Gene Rfer_2742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2742 
Symbol 
ID3962741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3026872 
End bp3028506 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content52% 
IMG OID637917561 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_523986 
Protein GI89901515 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.617202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAA TAAGTCTCAG GGTCAAAATC AGCCTGTATC TGTTCATCGT TCTTTCAGCG 
GTGGCGGTCC TGTTCACACT GGTTTTCGTT GAACACCGGG AGGAAGAACT GCAGAGTGAG
ATTTCCCGGC ATGTCACACA AATTTCCGAC GTGATTATCG CGAGTACCCG TAGTTCGATG
TTGGTGAACG AGCGTGACAT TGCTGGCAAG ATCATTGAGG ACATTGGCAA GCAAAAAGGC
ATTGAACGTG TCCGGGTGAT CGATAAAGAT GGCACGATCA TTCATTCAAA CCGGACATCA
GAGGTTGGCT ATTCGGTCGA ACAACAGGAC GAACCTTGTG TTCAATGCCA TAAGACCAGT
ACACCACTGG AGCAAGTCTC AGACGACAAG CGGTGGAAAG TCATTGAGAT GCCGGGGGGG
CACCGAGTTC TCGGTACCAT GCAAGCAATA CGCAACGAGC CTTCGTGTTC ATCTGCGTCC
TGCCACGAAC ATTCTGCCAG TCAGTCGGTG CTTGGCATAG TGGATGTTGC CTATTCTCTC
GATGAGATCG ACCAGTCGAG AAAGACGCAT ACCATTCACA TGATTGGCAT GGCAGCTGGG
TTCATTCTTA TTTTCGCTGT CAGCATCGGC GTTTTGCTGC AGCGCTTTAT CTATGTGCCT
TTGAAAGACA TGGATTCCGG CGCCAAGCAG ATCGCCGCTG GCCGCCTTGA TCAGAATATT
CCGGTGCGCA GCGATGACGA ATTCGGCCGC GTCGCGGCAT CTTTTAATCA TATGACTGAA
GCACTGAAAG CATCAAGGTC AGAGATGCAG GACATGTTGC ATACCCTGGA ATCCAAAGTC
ACAGAACGAA CCCGGGAACT GCTGGCTGCC AAGGCCGAGG TTGCGCAGGG GGAAAAGCTG
GCCTCTATCG GTGTGCTGGC GTCTGGCATT GCTCATGAAT TGAATAATCC GCTCACCGGC
GTGCTGACCT TTACCTCCCT GATGCGCAAA AAAGCGGCCG ATGGCAGTGA GGATGCTGCG
GACTTGGACC TGGTGATCCG CGAGACCAAA CGGTGTGCCA GCATCATCAG GCGGCTTCTC
GATTTCGCAA GGGAAAAAGT GCCGGTGAAG GGGTTTTTCA ACCTGAATCT GGTGATTGAA
GACACCGTGC GTTTTGTTGA ACGGCCAGCA TCCTTGCAGC AGATCGAGAT CACAACTGCT
CTTGATCCTG CGTTACCCCA GGTATGGGGT GACGCCGATC TGATCAAGCA GGTTATCTTG
AATTTGCTTG TCAATGCCCA GCAAGCCATC GAGGGCAAGG GCAACATTAA GGTCGCAAGT
CGCCTCTATC CCGGCATGGC CTCTGACAAA CCTGGCGTTG ATACCCTTCC GATGGTTGAA
ATAAGCGTGA CGGACACCGG TTGCGGTATT CCGCCAGCCA ACCTGGAGCG TATTTTCGAT
CCATTTTTTA CCTCGAAAGA GGTGGGCAAG GGAACGGGGC TGGGCTTGTC CGTCAGTTAT
GGCATTGTCA AAGCCCATGG AGGCAAGATC AATGTCGAGA GCGTGGTTGG AGAAGGAACT
ACTTTTTACG TCCTTCTGCC TATAACGTCT CCTTTTGATG AAACCGAATC CCAGGCCGCG
GAGATTACCC CATGA
 
Protein sequence
MRSISLRVKI SLYLFIVLSA VAVLFTLVFV EHREEELQSE ISRHVTQISD VIIASTRSSM 
LVNERDIAGK IIEDIGKQKG IERVRVIDKD GTIIHSNRTS EVGYSVEQQD EPCVQCHKTS
TPLEQVSDDK RWKVIEMPGG HRVLGTMQAI RNEPSCSSAS CHEHSASQSV LGIVDVAYSL
DEIDQSRKTH TIHMIGMAAG FILIFAVSIG VLLQRFIYVP LKDMDSGAKQ IAAGRLDQNI
PVRSDDEFGR VAASFNHMTE ALKASRSEMQ DMLHTLESKV TERTRELLAA KAEVAQGEKL
ASIGVLASGI AHELNNPLTG VLTFTSLMRK KAADGSEDAA DLDLVIRETK RCASIIRRLL
DFAREKVPVK GFFNLNLVIE DTVRFVERPA SLQQIEITTA LDPALPQVWG DADLIKQVIL
NLLVNAQQAI EGKGNIKVAS RLYPGMASDK PGVDTLPMVE ISVTDTGCGI PPANLERIFD
PFFTSKEVGK GTGLGLSVSY GIVKAHGGKI NVESVVGEGT TFYVLLPITS PFDETESQAA
EITP