Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2734 |
Symbol | |
ID | 3962733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3017432 |
End bp | 3019828 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917553 |
Product | radical SAM family protein |
Protein accession | YP_523978 |
Protein GI | 89901507 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.389809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGCCC TCGTTGACGT CTCTTTTTTT CCGCGTGCCG CCAAGCCACT GACCAGTTAC CGCAAGTTCT GGGCGGCGCG CTTTGGCGTT GCCAAATTTT TGCCGATGAG CCGCGAGGAG ATGAACCAAC TGGGTTGGGA CAGTTGCGAC ATCATCCTCG TGACGGGCGA TGCCTATGTG GATCATCCCA GCTTTGGCAT GGCGGTGATT GGCCGCATGT TGGAAGCCCA GGGTTTCAGG GTCGGCATCA TCGCACAGCC CGACTGGCAA AGCGCGGAAC CGTTCAAGGC TTTGGGCAAG CCCAATCTGT TTTGGGGTGT GACGGCGGGC AACATGGACT CCATGATCAA CCGCTACACG GCGGACCGAA AAATCCGCAG TGATGACGCC TACACGCCCG GCGACGTCGG CGGCAAGCGG CCCGACCGCG CCGCGATTGT CTACAGCCAG CGCTGCCGGG AAGCCTTCAA GGAGGTGCCG ATTGTGCTCG GCGGCATTGA AGGCAGTCTG CGCCGCATTG CCCACTACGA TTATTGGTCG GACAAGGTGC GCCGCTCGAT CGTGGTTGAT GCCAAGTGCG ACCTGCTGCT GTATGGCAAC GCCGAGCGCG CACTGGTCGA GATTGCGCAC CGCTTGGCCG CACGTGAGCC GGTCGAGAAA ATCACTGACG TGCGCGGCAC CGCTTTTGTG CGCCGTTCGG ATGACGCCTC AAACACCGGC TGGTTTGAGA TTGATTCGAC CAGCGTGGAC GAGCCGGGAC GGGTCGAGTC TCAGGTCAAC CCCTACCTGA CGACTTCGGA GCAGGCGGCG GGGCAGGGCG GCTCCTGCGC CAAAGAGGAT GGAAACAAAG ATGCTATTAA AACAATAGCC GTTAGCGATT GTTCCACGGG GGCTACAGGC CAATTAGGCT TAAATAATGA AGCAGGTCCC GTGATCCACC CGTTGACTTT TATGCCCAAT CCCAGCTTGT CAACCGGCTT GGGCAAGCTC AAGGTGCCTC CGCGGGACCG CTCGGTGATC CGCCTGCCGA GTTACGAGCA GGTTAAAAGC GACCCGGTGC TGTATGCCCA CGCCAACCGC GTGCTGCACC TGGAAACCAA CCCCGGCAAC GCCCGCGCGC TGGTGCAGGC GCATGGTGTG GGCGCCACTG CGCGCGATGT CTGGATCACC CCGCCGCCGA TTCCTTTGAG CACCGCCGAG ATGGATTTCG TCTTTGACCT GCCTTACGCG CGCAGCCCGC ATCCCAGCTA CGCCGATGCG CAGGGCAGCC ATGACGGCAG CACCAAAATC CCGGCCTGGG AGATGATTCG CTTCAGCATC AACATCATGC GCGGCTGCTT TGGCGGCTGC ACCTTCTGCA GCATTACCGA ACACGAAGGC CGCATCATCC AGAGCCGATC GGAAGACTCG GTGATCCGCG AGATTGAGGA TGTGCGCGAC AAGGTGAAGG GCTTTACCGG CACGATCTCA GACCTGGGCG GCCCCACGGC CAATATGTAC CGGCTGGGCT GCAAGAGCCC CGAGATTGAA GCGGCATGCC GCAAACCCAG TTGTGTCTAT CCTGGCATTT GCCAAAACCT GAGCACCAGC CACGACCCGC TGATCCAGAT TTACCGGCGC GGGCGGGCGC TTAAAGGCAT CAAGAAAATC CTGATTGGCT CCGGCGTGCG TTACGACCTG GCGGTGCAAA GCCCGGAGTA CGTGAAAGAG CTGGTACAGC ACCACGTCGG CGGTTACCTC AAGATTGCCC CCGAGCACAC TGAGGCAGGT CCGCTGACCA AGATGATGAA GCCCGGCATT GGCACCTATG ACAAGTTCAA GACGCTGTTT GACAAGTTCA CCCTGGAAGC CGGCAAGAAA CAGTTTTTGA TACCGTATTT CATCGCTGCC CATCCCGGCA CCAGCGATGA AGACATGATG AACCTGGCGC TGTGGCTGAA GAAAAACGGT TTCCGTGCCG ATCAGGTGCA GACCTTCTAC CCCAGCCCCA TGGCAACCGC CACGGCCATG TACCACACCG GCAGGAACCC GCTGCGCAAG ATCACCCACG ACAGTGAGAC GGTGGACATC GTGCGGGGTG AAAAACGCCG CCGTCTGCAC AAAGCGTTTT TGCGCTACCA CGACGCCAAC AACTGGCCGC TGTTACGCGA AGCGCTCAAG GCCATGGGGC GCGCTGACTT GATTGGCAAT GGCAAGCATC ACCTGATACC GACGTTTCAG CCGCTGCTGG ATGGCAGCTA TGCCAGCGCA CGGCACAAAA ATGCGACCGC TACCGGGGGG GCTGCACTGG CCAGCAAGGT GCAGCCTGGG CGATTGCTGA CCCAGCACAC CGGCTTGCCC CCGCGCGATA CGGGTTCTGG GCGCTTGGGT GGCAATGCAG CAAGAAAAGC ACGATAG
|
Protein sequence | MNALVDVSFF PRAAKPLTSY RKFWAARFGV AKFLPMSREE MNQLGWDSCD IILVTGDAYV DHPSFGMAVI GRMLEAQGFR VGIIAQPDWQ SAEPFKALGK PNLFWGVTAG NMDSMINRYT ADRKIRSDDA YTPGDVGGKR PDRAAIVYSQ RCREAFKEVP IVLGGIEGSL RRIAHYDYWS DKVRRSIVVD AKCDLLLYGN AERALVEIAH RLAAREPVEK ITDVRGTAFV RRSDDASNTG WFEIDSTSVD EPGRVESQVN PYLTTSEQAA GQGGSCAKED GNKDAIKTIA VSDCSTGATG QLGLNNEAGP VIHPLTFMPN PSLSTGLGKL KVPPRDRSVI RLPSYEQVKS DPVLYAHANR VLHLETNPGN ARALVQAHGV GATARDVWIT PPPIPLSTAE MDFVFDLPYA RSPHPSYADA QGSHDGSTKI PAWEMIRFSI NIMRGCFGGC TFCSITEHEG RIIQSRSEDS VIREIEDVRD KVKGFTGTIS DLGGPTANMY RLGCKSPEIE AACRKPSCVY PGICQNLSTS HDPLIQIYRR GRALKGIKKI LIGSGVRYDL AVQSPEYVKE LVQHHVGGYL KIAPEHTEAG PLTKMMKPGI GTYDKFKTLF DKFTLEAGKK QFLIPYFIAA HPGTSDEDMM NLALWLKKNG FRADQVQTFY PSPMATATAM YHTGRNPLRK ITHDSETVDI VRGEKRRRLH KAFLRYHDAN NWPLLREALK AMGRADLIGN GKHHLIPTFQ PLLDGSYASA RHKNATATGG AALASKVQPG RLLTQHTGLP PRDTGSGRLG GNAARKAR
|
| |