| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2729 |
|---|
| Symbol | |
|---|
| ID | 3962728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3012814 |
|---|
| End bp | 3013968 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637917548 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_523973 |
|---|
| Protein GI | 89901502 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAT TCAGTTTTGA AACCGCCCCC AGAATCATTT GTGAACAGGG CGGAGCCAAT
CGTCTGGGCG AGATCGCCAA AGGCATGGGC ATTTCCCGAC TCTTTCTGGT TACCGACGCG
GGTCTGATCA AGGCCAAACT CATCGACGGT GCCCTGGCCT CATTGACCGC CGCTGGTGTC
GCGGCAACCG TCTTTTCCGA CGTTCTGGCC GACCCACCCG AGCTCAGTGT GCAGGCTGCA
GTGGACGCCG CGCGTGCCGC GGGCGCCGAC GGCGTCCTTG GCTTCGGTGG CGGCAGCTCG
CTTGATACGG CAAAACTCGT CGCCCTACTG GCATGCACGC CGCAGGCGCT GCCCGACATC
TACGGCATCG GCCTGGCGCG CGGCCCGCGC CTGCCACTGA TCCAGGTGCC GACCACTGCA
GGCACCGGTT CCGAAGTCAC GCCGATTTCC ATCCTCACCA CCCCCAGCCA TGAAAAGAAG
GGCGTGGTCT CGCCGCTGCT CTACCCGGAC GTGGCACTGC TCGACAGCCG CCTCACGCTG
GGGCTGCCAC CCACTGTGAC GGCCATGACC GGCGTCGATG CCATGGTGCA TGCAATCGAA
TCCTTCTCCA CCCGCTTGAA GAAAAACCCG CTCTCCGACG CGCTGGCAAT CAAGGCGCTG
CAACTGCTCT ATGCCAACCT GCCAGCGGCA GTGAACGACG GCAAGGACCC GACCGTGCGC
GAGAACATGT TGCTCGGCTC CTTATTCGCC GGCATGGCCT TCGCCAACGC ACCCGTAGGT
GCCGTGCACG CGCTGGCCTA TCCGCTTGGT GGTCACTATG GCCTGCCGCA CGGCTTGACA
AATTCCCTGG TCTTCGTGGC GGTGCTGAGG TTCAATCTTG CTGCGGCGCA AGGCCTCTAT
GCCGAGCTGG GCCGCGCCAT CCTGCCGGAA CTGGCTGCTG CTGGCGACAG CGAAGCGGCA
GCCAGCTTCG TGGCGGCCAT CAGCGCGCGC GTGGCGGCCA TGCCCTACGC CCAAAGCCTG
CGTGATGCAG GCGTCAAGCA GGATGACCTG CCGATGCTGG CGCGCGACGC CATGAACGTC
CAGCGCCTGC TGGTGAACAA CCCGCGCGAT GTGAGCTTTG ATGACGCGCT GGCCATGTAC
CAGGCCGCCT ACTGA
|
|---|
| Protein sequence | MSQFSFETAP RIICEQGGAN RLGEIAKGMG ISRLFLVTDA GLIKAKLIDG ALASLTAAGV
AATVFSDVLA DPPELSVQAA VDAARAAGAD GVLGFGGGSS LDTAKLVALL ACTPQALPDI
YGIGLARGPR LPLIQVPTTA GTGSEVTPIS ILTTPSHEKK GVVSPLLYPD VALLDSRLTL
GLPPTVTAMT GVDAMVHAIE SFSTRLKKNP LSDALAIKAL QLLYANLPAA VNDGKDPTVR
ENMLLGSLFA GMAFANAPVG AVHALAYPLG GHYGLPHGLT NSLVFVAVLR FNLAAAQGLY
AELGRAILPE LAAAGDSEAA ASFVAAISAR VAAMPYAQSL RDAGVKQDDL PMLARDAMNV
QRLLVNNPRD VSFDDALAMY QAAY
|
|---|
| |