| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2727 |
|---|
| Symbol | |
|---|
| ID | 3962726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3008645 |
|---|
| End bp | 3009961 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637917546 |
|---|
| Product | L-sorbosone dehydrogenase |
|---|
| Protein accession | YP_523971 |
|---|
| Protein GI | 89901500 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACGC GCTCAAGCTC CGCGCTGATT GGCGCGATGG TATTGGCACT CGCCGCCTGC
GGTGAGGTGG CCACGCTGCC ACTATCGGCC GGCATCGGGC CAGAGCCCAA GTTGCCACCG
CCACGGCACA CGCTGATTCC AACGGTGAAC ATCGCGCCCG CCAAGGGCTG GCCGTCTGGC
GGGAAGCCAC AGGCGGCACC GGGTACGCGC GTGAACGCGT TCGCCAGCGG CCTTGATCAC
CCGCGCTGGC TTTTTGTACT ACCTAACGGG GATGTGCTGG TGGCTGAGAC CAATGCCCCG
CCCAAGCCCG AAGACGCCAA GGGCATCAAG GCTTGGCTGA CCGGCTTGGT GATGAAGCGG
GCCGGAGCGG CTGTGCTCAG CGCCAACCGC ATCACCCTGC TGCGCGATAC CGATGGCGAC
GGGGTAGCGG ACCAGCGCTC GGCGCTGCTG GAGGGGCTGA ACTCACCTTT TGGCATGGCG
CTGGTGGGCA ACGCGCTTTA CGTGGCTACC TCCGACGCGG TGCTGCGCTT TGCATACACA
GCCGGCGACA CACGCATCAG CGTGCCTGGC GACAAGCTGA TCGACTTGCC TGCGGGTCCG
ATCAACCACC ACTGGACCAA GAACCTCATC GCCAGCCCGG ACGGCAGCAA GCTCTACGTC
ACCGTGGGCT CGAACAGCAA CGTGGCTGAG CGAGGCATGG CGGTAGAGAC GGAGCGCGCC
GCCATCTGGG AGGTGGACAT CAAGAGTGGT GCGCACCGGA TCTTTGCATC CGGCCTGCGT
AACCCGAATG GACTGGCATG GGAGCCTCAC AGCGGCGCGT TGTGGACGGT GGTGAACGAG
CGCGACGAGC TTGGCAGCGA CCTGGTTCCC GACTACATGA CCTCGGTGCG CGACGGCGCC
TTCTACGGTT GGCCTTACAG CTACTTCGGC CAACACCTCG ATGAGCGGGT GACACCACAG
CGGCCCGATC TGGTCGCCAC GGCGATTGCA CCGGACTACG CCTTGGGGCC GCACACCGCC
CCCTTGGGAT TGGCGTCCTC GGTCGGTACC ACGCTGCCGC CAGCCTTTTC CAAAGGCATG
TTCATCGGCC AGCACGGCTC ATGGAACCGC CGGCCCCACA GCGGCTACAA GGTGATATTT
GTACCCTTTG AAAGCGGCCA GCCCGTCGGT GCACCGATTG ACGTGCTGAC GGGCTTCCTC
AGTGAGCAAG GCACTGCCTT CGGCCGCCCC GTGGGTGTGG CGCTTGACAG GCAGGGCGCA
CTGCTGGTGG CCGATGATGT GGGCAATGTG GTCTGGCGTG TGAGCGCAGA GCATTAG
|
|---|
| Protein sequence | MRTRSSSALI GAMVLALAAC GEVATLPLSA GIGPEPKLPP PRHTLIPTVN IAPAKGWPSG
GKPQAAPGTR VNAFASGLDH PRWLFVLPNG DVLVAETNAP PKPEDAKGIK AWLTGLVMKR
AGAAVLSANR ITLLRDTDGD GVADQRSALL EGLNSPFGMA LVGNALYVAT SDAVLRFAYT
AGDTRISVPG DKLIDLPAGP INHHWTKNLI ASPDGSKLYV TVGSNSNVAE RGMAVETERA
AIWEVDIKSG AHRIFASGLR NPNGLAWEPH SGALWTVVNE RDELGSDLVP DYMTSVRDGA
FYGWPYSYFG QHLDERVTPQ RPDLVATAIA PDYALGPHTA PLGLASSVGT TLPPAFSKGM
FIGQHGSWNR RPHSGYKVIF VPFESGQPVG APIDVLTGFL SEQGTAFGRP VGVALDRQGA
LLVADDVGNV VWRVSAEH
|
|---|
| |