Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2698 |
Symbol | |
ID | 3964244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2967759 |
End bp | 2969570 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637917519 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_523945 |
Protein GI | 89901474 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCA GTCAAGCCAG CGACAAATCA CCGGCCTCAC CACCGCAGGC CTATACCCGG CTGCACAGCC ACTTCAGGTG GCAGGTGCCC GAGCAGTTCA ACATCGCCCA GGTTTGTTGT GCGCGCTGGG CGGCGCAGCC AGACGCTACC AAAAAAGTAG CTATTTGCGC TTACGAGACG GGGGCTAGCG GCCAGTTTTA TACTTATTCT GAACTGCAGG CGCAGGCCAA CCGCTTGTCC AACGTGCTCA CGGCATTGGG GGTAGGGCGG GGCGACCGGG TCGCGATTGT GATGCCGCAG TGCTTCGAGA CCGCCGTGGC CTACGTGGCG GTGCTGCAAA TGGGCGCGGT GGCGATGCCG TTGTCGATGC TGTTTGGCCC GCAGGCGCTG GAGTTTCGCC TGCATGACGG CGAAGCCGTG GTGGCCATTG GCGCCGCCAG CGCGCTGGAA GGCTTGCAGG CGGTGCGAGC CAACTGCCCG GTGCTGCACT ACGTGCTGGG CGTGGGCGAT CTGGAGGCCA CCGACCAGCG AGCCGACCTC AATTACGCGC TGGCGCTGGC GCAGGAGGAC GCGCACTTCA CGCCGGTCGC CACGCTGGCC GAGGAGGCCG CCGTGTTGAT CTACACCAGC GGCACCACCG GCAACCCCAA GGGGGCGCTG ATCCCCCACC GCGCCCTGAT CGGGAACCTG ACCGGTTTTG TCTGCAGCCA AAACTGGTTT GGTTTTGATC CCGCCGCCAA CCCGGCCAGC GCGGGGCTAG GCGATTTGCC CGTGGGCTCG GACGCCGTCT TCTGGAGCCC GGCCGACTGG GCCTGGACCG GCGGCCTGAT GGATGCCCTT TTGCCCACGC TTTACTTTGG CCGCACGATC GTGGCGTACA ACGGCCGCTT CAGCCCGCAA ACGGCGCTGG AGCTGATGCG CGACTGCCAT GTGACGCACA CGTTTTTGTT TCCGACCGCA CTCAAGGCCA TGATGAAGGC TTATCCGGGC AGCGCGCGCC ACACCGTGCG CCAGCAGTTC AAGCTACAAC TGCAAGCCAT CATGAGCGCG GGCGAGGCGG TGGGTGACGC GGTATTTGAC TATTGCCAGC AGCAATTGGG TGTGACGGTC AACGAGATGT TTGGCCAGAC CGAGATCAAC TACATCGTCG GCAATTGTTC TGCCCAATGG CCGCCCAAGC CTGGCAGCAT GGGCATGGGC TACCCCGGTC ATCGGGTGGC GGTGATAGAC GATGCGGGCG CCGAGTGCCC GGTGGGTGTG GCCGGTGACG TGGCTTTGAA CCGGTTTGAC CGGCACGGTG ATGCGGACCC GATTTTCTTT TTGGGCTACT GGAAAAACGA GAGTTCAACC CGTGCCAAAT TCACCGGCGA CTGGTGCCGC ACCGGCGATC TGGCGCTGCG TGACGCCGAC GGTTACCTGT GGTACCAGGG CCGTGCCGAT GACGTGTTCA AGGCCGCCGG TTACCGCATC GGCCCCGGCG AGATCGAGAA CTGCCTGGTC AAGCATCCGG CGGTGGCCAA CGCCGCCGTG GTGCCCAAGC CGGACCCGGC ACGCGGTTCA GTGGTCAAGG CCTATGTCGT GCTGGCTCCT GATTTTATAG CTGCTCGCCC TTTGGATACG GTGGCTAGGG CCGAGTTTGA TCTAAAACTC GTGGCACAGC TGCAAGCCCA CGTCAAAGGC ATGCTGGCGC CGTACGAGTA CCCGAAAGAG ATTGAATTCA TCGATGCCCT GCCCATGACC AGCACCGGCA AGGTGCAGCG GCGGGTGTTG CGGCTGCAGG AGGAGCAGCG CGCCCAACAA CGGGCGGGCT GA
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Protein sequence | MRVSQASDKS PASPPQAYTR LHSHFRWQVP EQFNIAQVCC ARWAAQPDAT KKVAICAYET GASGQFYTYS ELQAQANRLS NVLTALGVGR GDRVAIVMPQ CFETAVAYVA VLQMGAVAMP LSMLFGPQAL EFRLHDGEAV VAIGAASALE GLQAVRANCP VLHYVLGVGD LEATDQRADL NYALALAQED AHFTPVATLA EEAAVLIYTS GTTGNPKGAL IPHRALIGNL TGFVCSQNWF GFDPAANPAS AGLGDLPVGS DAVFWSPADW AWTGGLMDAL LPTLYFGRTI VAYNGRFSPQ TALELMRDCH VTHTFLFPTA LKAMMKAYPG SARHTVRQQF KLQLQAIMSA GEAVGDAVFD YCQQQLGVTV NEMFGQTEIN YIVGNCSAQW PPKPGSMGMG YPGHRVAVID DAGAECPVGV AGDVALNRFD RHGDADPIFF LGYWKNESST RAKFTGDWCR TGDLALRDAD GYLWYQGRAD DVFKAAGYRI GPGEIENCLV KHPAVANAAV VPKPDPARGS VVKAYVVLAP DFIAARPLDT VARAEFDLKL VAQLQAHVKG MLAPYEYPKE IEFIDALPMT STGKVQRRVL RLQEEQRAQQ RAG
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