Gene Rfer_2698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2698 
Symbol 
ID3964244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2967759 
End bp2969570 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content64% 
IMG OID637917519 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_523945 
Protein GI89901474 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCA GTCAAGCCAG CGACAAATCA CCGGCCTCAC CACCGCAGGC CTATACCCGG 
CTGCACAGCC ACTTCAGGTG GCAGGTGCCC GAGCAGTTCA ACATCGCCCA GGTTTGTTGT
GCGCGCTGGG CGGCGCAGCC AGACGCTACC AAAAAAGTAG CTATTTGCGC TTACGAGACG
GGGGCTAGCG GCCAGTTTTA TACTTATTCT GAACTGCAGG CGCAGGCCAA CCGCTTGTCC
AACGTGCTCA CGGCATTGGG GGTAGGGCGG GGCGACCGGG TCGCGATTGT GATGCCGCAG
TGCTTCGAGA CCGCCGTGGC CTACGTGGCG GTGCTGCAAA TGGGCGCGGT GGCGATGCCG
TTGTCGATGC TGTTTGGCCC GCAGGCGCTG GAGTTTCGCC TGCATGACGG CGAAGCCGTG
GTGGCCATTG GCGCCGCCAG CGCGCTGGAA GGCTTGCAGG CGGTGCGAGC CAACTGCCCG
GTGCTGCACT ACGTGCTGGG CGTGGGCGAT CTGGAGGCCA CCGACCAGCG AGCCGACCTC
AATTACGCGC TGGCGCTGGC GCAGGAGGAC GCGCACTTCA CGCCGGTCGC CACGCTGGCC
GAGGAGGCCG CCGTGTTGAT CTACACCAGC GGCACCACCG GCAACCCCAA GGGGGCGCTG
ATCCCCCACC GCGCCCTGAT CGGGAACCTG ACCGGTTTTG TCTGCAGCCA AAACTGGTTT
GGTTTTGATC CCGCCGCCAA CCCGGCCAGC GCGGGGCTAG GCGATTTGCC CGTGGGCTCG
GACGCCGTCT TCTGGAGCCC GGCCGACTGG GCCTGGACCG GCGGCCTGAT GGATGCCCTT
TTGCCCACGC TTTACTTTGG CCGCACGATC GTGGCGTACA ACGGCCGCTT CAGCCCGCAA
ACGGCGCTGG AGCTGATGCG CGACTGCCAT GTGACGCACA CGTTTTTGTT TCCGACCGCA
CTCAAGGCCA TGATGAAGGC TTATCCGGGC AGCGCGCGCC ACACCGTGCG CCAGCAGTTC
AAGCTACAAC TGCAAGCCAT CATGAGCGCG GGCGAGGCGG TGGGTGACGC GGTATTTGAC
TATTGCCAGC AGCAATTGGG TGTGACGGTC AACGAGATGT TTGGCCAGAC CGAGATCAAC
TACATCGTCG GCAATTGTTC TGCCCAATGG CCGCCCAAGC CTGGCAGCAT GGGCATGGGC
TACCCCGGTC ATCGGGTGGC GGTGATAGAC GATGCGGGCG CCGAGTGCCC GGTGGGTGTG
GCCGGTGACG TGGCTTTGAA CCGGTTTGAC CGGCACGGTG ATGCGGACCC GATTTTCTTT
TTGGGCTACT GGAAAAACGA GAGTTCAACC CGTGCCAAAT TCACCGGCGA CTGGTGCCGC
ACCGGCGATC TGGCGCTGCG TGACGCCGAC GGTTACCTGT GGTACCAGGG CCGTGCCGAT
GACGTGTTCA AGGCCGCCGG TTACCGCATC GGCCCCGGCG AGATCGAGAA CTGCCTGGTC
AAGCATCCGG CGGTGGCCAA CGCCGCCGTG GTGCCCAAGC CGGACCCGGC ACGCGGTTCA
GTGGTCAAGG CCTATGTCGT GCTGGCTCCT GATTTTATAG CTGCTCGCCC TTTGGATACG
GTGGCTAGGG CCGAGTTTGA TCTAAAACTC GTGGCACAGC TGCAAGCCCA CGTCAAAGGC
ATGCTGGCGC CGTACGAGTA CCCGAAAGAG ATTGAATTCA TCGATGCCCT GCCCATGACC
AGCACCGGCA AGGTGCAGCG GCGGGTGTTG CGGCTGCAGG AGGAGCAGCG CGCCCAACAA
CGGGCGGGCT GA
 
Protein sequence
MRVSQASDKS PASPPQAYTR LHSHFRWQVP EQFNIAQVCC ARWAAQPDAT KKVAICAYET 
GASGQFYTYS ELQAQANRLS NVLTALGVGR GDRVAIVMPQ CFETAVAYVA VLQMGAVAMP
LSMLFGPQAL EFRLHDGEAV VAIGAASALE GLQAVRANCP VLHYVLGVGD LEATDQRADL
NYALALAQED AHFTPVATLA EEAAVLIYTS GTTGNPKGAL IPHRALIGNL TGFVCSQNWF
GFDPAANPAS AGLGDLPVGS DAVFWSPADW AWTGGLMDAL LPTLYFGRTI VAYNGRFSPQ
TALELMRDCH VTHTFLFPTA LKAMMKAYPG SARHTVRQQF KLQLQAIMSA GEAVGDAVFD
YCQQQLGVTV NEMFGQTEIN YIVGNCSAQW PPKPGSMGMG YPGHRVAVID DAGAECPVGV
AGDVALNRFD RHGDADPIFF LGYWKNESST RAKFTGDWCR TGDLALRDAD GYLWYQGRAD
DVFKAAGYRI GPGEIENCLV KHPAVANAAV VPKPDPARGS VVKAYVVLAP DFIAARPLDT
VARAEFDLKL VAQLQAHVKG MLAPYEYPKE IEFIDALPMT STGKVQRRVL RLQEEQRAQQ
RAG