| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2691 |
|---|
| Symbol | |
|---|
| ID | 3964237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 2961843 |
|---|
| End bp | 2962949 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637917512 |
|---|
| Product | UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| Protein accession | YP_523938 |
|---|
| Protein GI | 89901467 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGTCG AGAAAAATGT TCCCCTGCAG GCTTTCAATA GCTTTCACAT CGTGGCCAAG
GCGCATGCGC TGGTGCGCAT TGCCAGCGAG GCGGACTTGC ACGCGCTGCT GGCTGACCCC
GAGCTGCGTG CCAGTCCCAA ATTTGTATTG GGCGGCGGCA GCAATATTGT GCTCACCGGC
GATGTCAAAG CACTGGTGCT CAAGGTTGAA CTCATGGGTC GACGGCTGCT GATGGAGACC
GACAAGGCCT TCATCGTCCA GGCCGGTGCG GGCGAGAGCT GGCACGAACT GGTGGCCTGG
ACGCTGGCAC AAGGTTACCC GGGGCTGGAA AACCTGGCTT TGATTCCCGG CACCGTCGGC
GCGGCGCCGG TGCAGAACAT CGGCGCTTAT GGCGTGGAGT TGCAGGATCG CTTTGATTCG
CTCGATGCCA TCGACCTGCA GACCGGGCAG GTCTTCACGC TCCATGCGGC GCAGTGCGCG
TTTGGCTACC GCGACTCGGT ATTCAAGCAT GGGGCCGGGG CGGCGGCGGT GCCGGACGGC
GCGGTGAGCG CGGGTGCTGT GGCCGGTGGG CATCAGGTGC TGGGCCTGAA GGACCGCGCG
CTGATACTGC GGGTGCGCTT TGCCTTGCCC AAAAGCTGGA AGCCGGTGCT GGGTTATGCC
GACCTGGACA AGAAAATGGC GGAGCATCAA TGCGCCCATC CGACCGCGCA GCAAATCTTT
GATTGGGTGT GTGAGATCCG CCGTGCCAAA TTGCCGGACC CGCAAGTCAT CGGCAACGTC
GGCAGCTTCT TCAAGAACCC AACGGTGACG CCTGAACAGT GCGTGGACAT CATCGCGCGC
GACCCCAAGG TGGTGCATTA CCACCTGGCC GACGGCGGCG TCAAGCTGGC GGCGGGCTGG
CTGATTGACT CCTGCGGCTG GCGCGGCAAA TCGGTCGGCC AGGCCGGTGT CTATGAAAAG
CAGGCGCTGG TGCTCGTGAA CCGCGGCGGC GTCGACAGTC CCTTTGGTGC CACCGGCGGT
GAAGTCATGA CGCTGGCGCG CGCCATCCAG ACCAGCGTCT ATGAGCGTTT TGGCATCCGG
CTGGAGCCGG AGCCGGTGGT GGTTTAA
|
|---|
| Protein sequence | MLVEKNVPLQ AFNSFHIVAK AHALVRIASE ADLHALLADP ELRASPKFVL GGGSNIVLTG
DVKALVLKVE LMGRRLLMET DKAFIVQAGA GESWHELVAW TLAQGYPGLE NLALIPGTVG
AAPVQNIGAY GVELQDRFDS LDAIDLQTGQ VFTLHAAQCA FGYRDSVFKH GAGAAAVPDG
AVSAGAVAGG HQVLGLKDRA LILRVRFALP KSWKPVLGYA DLDKKMAEHQ CAHPTAQQIF
DWVCEIRRAK LPDPQVIGNV GSFFKNPTVT PEQCVDIIAR DPKVVHYHLA DGGVKLAAGW
LIDSCGWRGK SVGQAGVYEK QALVLVNRGG VDSPFGATGG EVMTLARAIQ TSVYERFGIR
LEPEPVVV
|
|---|
| |