| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2675 |
|---|
| Symbol | |
|---|
| ID | 3962005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2942396 |
|---|
| End bp | 2943124 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637917493 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_523922 |
|---|
| Protein GI | 89901451 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.93656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAATCG AACCATCATC AGCCAGCAGT CCCGTACCGC AACATATTGC CGTCATCATG
GATGGCAATC GGCGTTGGGC CAAGCAACAC GGTTTACCCG TGGCGCTGGG CCATGCCAAT
GGCGCCCGCC AAGTGCGCAG AATTGTGCAA GCCTGCGCCG AGCGTGGCGT GCGCTACCTC
ACCCTGTTTG CCTTCAGCAC CGAAAACTGG CGTCGCCCGC AGGACGAAGT CTCCAGCCTG
ATGGGCTTGA TGACGCTCTA CCTGCAAAAA GAAGTCAAGA ACATGAGCGC CAAAGGCGTG
CGCCTGAAGA TCGTGGGCGA CATCTCGGGC TTTAGTGCGC GCATTCAAGA GCTGATCCTT
CAAGCGCAAG AAAAAACCGC CCACAACGAC ACCATCACCC TCACTATCGC CGCTAACTAC
GGCGGCCGCT GGGACATGGT CGAAGCCGTC AAGTCGTGGC AAACAGCGCA CCCTGGCGAG
TCTGTCAATG GGATCGATGA AGCGGCCCTG AGCGAGCACC TCGGTCTGTC CTATGCGCCC
GACCCTGATT TACTCATTCG CACCGGCGGC GAGTCGCGCA TCAGCAACTT CATGCTGTGG
CAACTGGCCT ACACCGAGCT CTTTTTCACC GACGCATTGT GGCCCAGCTT CACCCCCGAC
GAACTTGACC GCGCCCTTAC CTGGTACGGC ACACGCGAGC GCCGCTTTGG CGGTAGCACC
AAAACCTGA
|
|---|
| Protein sequence | MSIEPSSASS PVPQHIAVIM DGNRRWAKQH GLPVALGHAN GARQVRRIVQ ACAERGVRYL
TLFAFSTENW RRPQDEVSSL MGLMTLYLQK EVKNMSAKGV RLKIVGDISG FSARIQELIL
QAQEKTAHND TITLTIAANY GGRWDMVEAV KSWQTAHPGE SVNGIDEAAL SEHLGLSYAP
DPDLLIRTGG ESRISNFMLW QLAYTELFFT DALWPSFTPD ELDRALTWYG TRERRFGGST
KT
|
|---|
| |