Gene Rfer_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2672 
Symbol 
ID3960979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2940210 
End bp2940902 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID637917490 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_523919 
Protein GI89901448 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.866778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAG ACCTGTCGAT CCTGCGCCTG GTGCTCAATG CCAGCGTCGT TGTGCAACTG 
GTGATGCTGC TGCTGGTGGT GGTCTCCATG GCCAGCTGGG CCGCTATTTT TCGCAAGCTG
TTTGCCCTGA AACGGGTGAA ATTGCTCAAC GACACCTTCG AGCGCGAGTT CTGGTCTGGC
ACCAGCCTTA ATGATCTGTT CTCTGCCGCC GCCCAAAACG CCCGCGACTC CGGCCCGTTG
GAACGCATTT TTGCCAGCGG CATGCGTGAA TACCAAAAAC TGCGCGAGCG TCACATCACC
GACGCCAGCA CCCTGATGGA CGGCGCCCGC CGCGCCATGC GCGCGAGCTA CCAGCGCGAG
CTCGATGTGG TGGAGGCCAA CCTCTCGTTC CTGGCCTCGG TCGGCTCAGT CTCACCGTAT
CTCGGCTTGT TTGGCACCGT CTGGGGCATC ATGCACGCCT TCACCGGGCT GGCATCCATG
CAAACGGTGA CCCTCGCCAC GGTGGCCCCG GGCATTGCCG AGGCACTGGT GGCCACTGCC
ATTGGCCTGT TTGCCGCCAT TCCCGCCGTG GTGGCTTACA ACCGCTTCGC CCACGACATT
GACCGCATCG CGATCCGGCT GGAAACCTTC ATTGAAGAGT TCTCCAACAT CCTGCAGCGC
AACGTCAGCG CCCAGTCGGC CTCCGGCCAC TGA
 
Protein sequence
MNQDLSILRL VLNASVVVQL VMLLLVVVSM ASWAAIFRKL FALKRVKLLN DTFEREFWSG 
TSLNDLFSAA AQNARDSGPL ERIFASGMRE YQKLRERHIT DASTLMDGAR RAMRASYQRE
LDVVEANLSF LASVGSVSPY LGLFGTVWGI MHAFTGLASM QTVTLATVAP GIAEALVATA
IGLFAAIPAV VAYNRFAHDI DRIAIRLETF IEEFSNILQR NVSAQSASGH