Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2672 |
Symbol | |
ID | 3960979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2940210 |
End bp | 2940902 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917490 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_523919 |
Protein GI | 89901448 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.866778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAAG ACCTGTCGAT CCTGCGCCTG GTGCTCAATG CCAGCGTCGT TGTGCAACTG GTGATGCTGC TGCTGGTGGT GGTCTCCATG GCCAGCTGGG CCGCTATTTT TCGCAAGCTG TTTGCCCTGA AACGGGTGAA ATTGCTCAAC GACACCTTCG AGCGCGAGTT CTGGTCTGGC ACCAGCCTTA ATGATCTGTT CTCTGCCGCC GCCCAAAACG CCCGCGACTC CGGCCCGTTG GAACGCATTT TTGCCAGCGG CATGCGTGAA TACCAAAAAC TGCGCGAGCG TCACATCACC GACGCCAGCA CCCTGATGGA CGGCGCCCGC CGCGCCATGC GCGCGAGCTA CCAGCGCGAG CTCGATGTGG TGGAGGCCAA CCTCTCGTTC CTGGCCTCGG TCGGCTCAGT CTCACCGTAT CTCGGCTTGT TTGGCACCGT CTGGGGCATC ATGCACGCCT TCACCGGGCT GGCATCCATG CAAACGGTGA CCCTCGCCAC GGTGGCCCCG GGCATTGCCG AGGCACTGGT GGCCACTGCC ATTGGCCTGT TTGCCGCCAT TCCCGCCGTG GTGGCTTACA ACCGCTTCGC CCACGACATT GACCGCATCG CGATCCGGCT GGAAACCTTC ATTGAAGAGT TCTCCAACAT CCTGCAGCGC AACGTCAGCG CCCAGTCGGC CTCCGGCCAC TGA
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Protein sequence | MNQDLSILRL VLNASVVVQL VMLLLVVVSM ASWAAIFRKL FALKRVKLLN DTFEREFWSG TSLNDLFSAA AQNARDSGPL ERIFASGMRE YQKLRERHIT DASTLMDGAR RAMRASYQRE LDVVEANLSF LASVGSVSPY LGLFGTVWGI MHAFTGLASM QTVTLATVAP GIAEALVATA IGLFAAIPAV VAYNRFAHDI DRIAIRLETF IEEFSNILQR NVSAQSASGH
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