Gene Rfer_2671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2671 
Symbol 
ID3960978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2939020 
End bp2940213 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID637917489 
Productaminotransferase 
Protein accessionYP_523918 
Protein GI89901447 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCT CTGATCGCGC GCAGCGCATC GAGCCCTTTT ATGTGATGGA GGTCGCCAAA 
GCGGCGTCAG CACTGGCCTT CGACGTCGCG CGCAGCGCCT CACCCATGAT CTTTCTGAAC
ATTGGCGAGC CCGACTTTAC CGCGCCACCT TTGGTGCAAG AAGCGGCTTG CCGGTGCGTG
CGCGACGGCT TGACGCACTA CACACAGGCC ACCGGCATGA GTCCGTTGCG CGAACGCATC
AGCGACTGGT ATCTCAGCCG CTTCAATGTC CAGGTGCCAG CCAGCCGCAT TGTGATCACC
GCCGGCGCCT CGGCGGCCTT GCAGCTGGCC TGTCTGGCCC TGATCGAATC GGGCGACGAG
ATCATCATGC CCGACCCCAG CTACCCGTGC AACCGGCACT TTGTGTCAGC CGCCGACGGC
AGCGCCGTGC TGCTTCCCAC CACGGCGGCC GAGCGCTTTC AGCTCAGCGC CGACAAGGTG
CAAGCCGCCT GGGGACCAAA AACACATGGC GTTTTGCTGG CCTCGCCCTC CAACCCCACC
GGCACCTCCA TTGCGCCGGA TGAACTGCGC CGCATTCACC AGGTAGTGAG CAACAAGGGC
GGCATCACGC TGGTCGATGA GATCTACCTC GGCCTGAGCT TTGACGCGCA GTATGGGCAA
ACGGCGCTGG CGCTTGATGA CAACATCATC AGCATCAACA GTTTCAGCAA ATACTTCAAC
ATGACCGGCT GGCGGCTGGG CTGGTTGGTG GTGCCGGAGC CCTTGGTGCC GGTGATTGAG
CGTCTGGCGC AAAACCTGTT CATCTGCCCC AGCACCATCT CCCAATACGC CGCCCTGGCC
TGCTTTGAGT CAAGCAGTCT GCTTGAGTAC GAGCGCCGCC GCGCCGAGTT CAAGGCCCGA
CGTGATTACT TCATACCGGA GCTCAACGCC CTCGGGCTCA CCGTGCCGGT CATGCCCGAT
GGCGCCTTTT ACGCCTGGGC CGATTGCTCT GCCGCCTGTC GGGCCAAGGG CCTCAAAGAC
AGCTGGGACT TGTCGTTTGA CCTCATGCAG CAGGCCCATG TCGCCGTCAC GCCCGGGCGC
GACTTCGGTA CGGCTGACGC CCACAATTTC ATCCGCTTTT CTACGGCCAG TTCGATGCCG
CAGCTGCATG AAGCCATCCA ACGATTAAAA GCCTATCTGG AACCCCTGAA ATGA
 
Protein sequence
MRISDRAQRI EPFYVMEVAK AASALAFDVA RSASPMIFLN IGEPDFTAPP LVQEAACRCV 
RDGLTHYTQA TGMSPLRERI SDWYLSRFNV QVPASRIVIT AGASAALQLA CLALIESGDE
IIMPDPSYPC NRHFVSAADG SAVLLPTTAA ERFQLSADKV QAAWGPKTHG VLLASPSNPT
GTSIAPDELR RIHQVVSNKG GITLVDEIYL GLSFDAQYGQ TALALDDNII SINSFSKYFN
MTGWRLGWLV VPEPLVPVIE RLAQNLFICP STISQYAALA CFESSSLLEY ERRRAEFKAR
RDYFIPELNA LGLTVPVMPD GAFYAWADCS AACRAKGLKD SWDLSFDLMQ QAHVAVTPGR
DFGTADAHNF IRFSTASSMP QLHEAIQRLK AYLEPLK