Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2671 |
Symbol | |
ID | 3960978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2939020 |
End bp | 2940213 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917489 |
Product | aminotransferase |
Protein accession | YP_523918 |
Protein GI | 89901447 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAATCT CTGATCGCGC GCAGCGCATC GAGCCCTTTT ATGTGATGGA GGTCGCCAAA GCGGCGTCAG CACTGGCCTT CGACGTCGCG CGCAGCGCCT CACCCATGAT CTTTCTGAAC ATTGGCGAGC CCGACTTTAC CGCGCCACCT TTGGTGCAAG AAGCGGCTTG CCGGTGCGTG CGCGACGGCT TGACGCACTA CACACAGGCC ACCGGCATGA GTCCGTTGCG CGAACGCATC AGCGACTGGT ATCTCAGCCG CTTCAATGTC CAGGTGCCAG CCAGCCGCAT TGTGATCACC GCCGGCGCCT CGGCGGCCTT GCAGCTGGCC TGTCTGGCCC TGATCGAATC GGGCGACGAG ATCATCATGC CCGACCCCAG CTACCCGTGC AACCGGCACT TTGTGTCAGC CGCCGACGGC AGCGCCGTGC TGCTTCCCAC CACGGCGGCC GAGCGCTTTC AGCTCAGCGC CGACAAGGTG CAAGCCGCCT GGGGACCAAA AACACATGGC GTTTTGCTGG CCTCGCCCTC CAACCCCACC GGCACCTCCA TTGCGCCGGA TGAACTGCGC CGCATTCACC AGGTAGTGAG CAACAAGGGC GGCATCACGC TGGTCGATGA GATCTACCTC GGCCTGAGCT TTGACGCGCA GTATGGGCAA ACGGCGCTGG CGCTTGATGA CAACATCATC AGCATCAACA GTTTCAGCAA ATACTTCAAC ATGACCGGCT GGCGGCTGGG CTGGTTGGTG GTGCCGGAGC CCTTGGTGCC GGTGATTGAG CGTCTGGCGC AAAACCTGTT CATCTGCCCC AGCACCATCT CCCAATACGC CGCCCTGGCC TGCTTTGAGT CAAGCAGTCT GCTTGAGTAC GAGCGCCGCC GCGCCGAGTT CAAGGCCCGA CGTGATTACT TCATACCGGA GCTCAACGCC CTCGGGCTCA CCGTGCCGGT CATGCCCGAT GGCGCCTTTT ACGCCTGGGC CGATTGCTCT GCCGCCTGTC GGGCCAAGGG CCTCAAAGAC AGCTGGGACT TGTCGTTTGA CCTCATGCAG CAGGCCCATG TCGCCGTCAC GCCCGGGCGC GACTTCGGTA CGGCTGACGC CCACAATTTC ATCCGCTTTT CTACGGCCAG TTCGATGCCG CAGCTGCATG AAGCCATCCA ACGATTAAAA GCCTATCTGG AACCCCTGAA ATGA
|
Protein sequence | MRISDRAQRI EPFYVMEVAK AASALAFDVA RSASPMIFLN IGEPDFTAPP LVQEAACRCV RDGLTHYTQA TGMSPLRERI SDWYLSRFNV QVPASRIVIT AGASAALQLA CLALIESGDE IIMPDPSYPC NRHFVSAADG SAVLLPTTAA ERFQLSADKV QAAWGPKTHG VLLASPSNPT GTSIAPDELR RIHQVVSNKG GITLVDEIYL GLSFDAQYGQ TALALDDNII SINSFSKYFN MTGWRLGWLV VPEPLVPVIE RLAQNLFICP STISQYAALA CFESSSLLEY ERRRAEFKAR RDYFIPELNA LGLTVPVMPD GAFYAWADCS AACRAKGLKD SWDLSFDLMQ QAHVAVTPGR DFGTADAHNF IRFSTASSMP QLHEAIQRLK AYLEPLK
|
| |