| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2663 |
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| Symbol | |
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| ID | 3960970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2929644 |
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| End bp | 2933729 |
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| Gene Length | 4086 bp |
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| Protein Length | 1361 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917481 |
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| Product | putative type-4 fimbrial biogenesis pily1-related signal peptide protein |
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| Protein accession | YP_523910 |
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| Protein GI | 89901439 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTCC GAATTTTGTT TTCAAGCCCA TCCAGCAAGT CATCGAAAAA AAAGTGGGGC
GTCCGGCTGG CCCTGCTGGC AGCCTTCTCG GCCATCACGG TCGGGGTTGT GATCAGTCAA
ACCATCACCC TGCCGCCCTT GGTGGTGCTG CCGGCCGAGC CGCTTTACAT GAACGGCGCC
AAGACCAAAG GCAACTTGAC GCTGGCGCTT TCGGTGGAAT TTCCGACCGT AGGGCAGACT
TATCGCGACG ACTTCGATTC GACCAAGGAG TACGTCGGCT ATTTTGACCC CAAAGCCTGT
TATCGCGCTG TTTTGAGCAG CGGTTCTCTC GGCAATTATT TCGACTGGCA GACCAACAAG
GGCACTTTTT CGGCGACCTG CCCAAGCAGT CAGTTCGATG GGAACTTCAT GAACTGGGCC
ACCTCGTCGG CCATCGATAT CATGCGTTAC GGCCTGACCG GCGGTAACCG CACCATTGAC
GACAGCAACA CAACGGTGGT TGACCGCGCT TGGTTGCCCG ACAACTTTTA CAAAAACTCC
AGCTACTTCT CCGAAAAATT TGTACCGAAC GCACAGTTGT CTGGCAGGAC CGAAAATTCG
CCCACGTCGT TTCCCAACGG CATGTGGATT TACAACTGTA AAAATCGCGT GTATTTTGCC
GACGCTCAGG ACAGTGGCAC AAGCTGCGAC AGTCCTTTCG GTGTTTCCGG TGCCCAAAGC
GAGCATCTAA TCAAGGCAAA CGCCAACAAC AAGGGAAACT TCTACGAAGT CAGAAACCTG
GTTTGCGACC CCAACAGTGC CACCAACCGC CTGATGACTT ATGACCCGGA TACCAAAAAA
TGGACGGGCC TGTGCTATCG CTATCCGAAC GGCAAGTACA AGCCAGTGGG ACAATTTCAG
ATGAATGCAG ACAACCTGAG GGTCTCTGTT TTGGGTTATC TTCAAGATGA CAATCGATCA
CGCTACGGTG GGGTGCTGCG TGCGCCGCTC AAATACCTGG GGCCCAAAAA CTATGACACC
AACTTCAATT TGCTGACTGC GGCCAATGCA CGCAGCGAAT GGGATGCCAC AACAGGTGTG
TTTGTCGCCA ACCCCCAGAG TGGTGATTCA ACCTATGGCG ATCAGGGCTT TGGTCAAAGT
GGGGTCATCA ACTATGTCAA CAAGTTCGGC ACACTCAACC CTGACAGCAT CGGCGAATAC
AAGACATACG ATCCACTCAG CGAGCTGTAT TACGAGGCGA TTCGTTATCT GCAGGGCAAG
CAGCCCACAG CCCAAGCCAT AACAAACGTG AGCGGTTCAA CGTCTTCCAA AGCGCTTCAA
GAAAATTTTC CGGTTTACAA AACCTGGACA GACCCGTTCG CAGGCTTCAC TGATACCACG
GACACCGGCA AAGGTTGTTT GAGAAACAGC ATTCTGACCA TCGCGGATGT ATTCACGCAC
AGCGACCGCT CACTCCCGGG TAACACGCTG GGCACCTCGA CTGATGACTT TGTGCGAAGT
GTAGAAACCA ACCCCGCACT AGATGTTCCG TTCTGGACCA GTGTGGTTGG CAGCTTCGAG
AGCAAAACGA CCTCTACCGC GACTGTGACC TACAGCGACA GCCAAGGACT CACCCAGACT
GCGGGCAACC TGGCCACCAA CAAACTCTAC GATGCCAGCA CATCTTATGA TTTGAGCAAC
GCCGCCACCG TAAGTACCGG CGCTGGAACT GGGTCTTACT ACATGGCCGG CTTGGCTTAT
TGGGCCAATA CCCAGAGTTT TCGTACCGAT TTACCCAAAG GACGGATCAA AACATATTCC
ATTGATGTGA ATGAGAACCG AGCCAGCGAC AACGTAGATT TCCGCCGGAC GCGGCAGCTG
TACCTCGGCG CCAAATATGG TGGCTTTGAC GACAGCGCGA CCGGCAACAC CGGCAACCCT
TACACGGGCG GCACCAACGT GCTTTGGCAG GGCACAGACG GAGAAGCCAA GAACTACTTT
CTGGTCAGCG ATGCCAAGAA ATTTCTGGAC TCTCTGGCCG AGGTATTCGC TCGCGTCGTG
GAAGAAACCG GCAGTATTGC CGGCGGCGCC ATTTCGACTC AGCGTCTTAC CGCAGGCCAG
GCAGAGGCCG TGTTCCAGGC CCGGTTTAAT CCGGTTGCCA ACTTCTGGAG TGGGCGTCTG
ATCAAATTCC CACTCACGCT GGATACGGCA GGCACTGGTC TGGTCATCGG CAACACCCCC
ACTTGGGAGG CGGGCCAGGT CTTGACCGCT GCAACCCTGG TCGACCACGG CGCTGCCAGA
AACATCGTCA TTGGCGCACC AATTGGACTG CAGGCTACGG TCTTGCCTAC CCCGTTCAAA
TGGGCTGATC TGGCCCAGGC CCACAAGGAC GCCCTCAATA TCAGCCCCTA TGGCGTCCCT
GCCCCAGTCG TTGACACGCT GGGCCCGGAC CGGCTTAATT ACCTGCGTGG CGACCGGAGC
AAGGAAATCA CACCCTCCAC ACCACTGGGC CCATTCCGTC CGCGTGACAT CGTTATGGGC
GATATCGTCA ACAGCGGCCT GGTGTACATG GGCAAGCCGT CGGGTAGCAT CACAGGGACC
GACTACAACA CTTTCTACGC GGCCAACAAA AGTCGCTCAC CCGTTATTTT TGCCAACGCG
AATGACGGCA TGCTGCACGC CTTTTACGAC AGCACTGGCG CCGAGGCATT CGCTTACATC
CCCGGATTCG TTGCTGGCAA ACTCAACCAA CTGCCCGATC AGGACTACAG CCACATCAGC
ATCAACGATG CAACACCCGC GGTATCAGAG GCTTATATCG GCGGTCAGTG GCGCAGTGTT
CTGGTCTCTG GTGTTGGCGG CGGGGGCCAG GGCCTGTATG CCCTGGATGT GACCAATCCA
GCAACTTTCA CCAAAGACAA TGTGCTCTGG GAGTTTACGG ACCGCGACCA TGTGGCCATG
GGCAATGTAC TGGGCACACC GCAGATCGTC AAGCTTCGTA CCACCAACAA TGGCGTTACC
CCCGTCGGCT ACAAATGGTA TGCGGTGGTC GCCAGTGGTA TTAACAACTA CGCGGCAGAC
GGTTACGCGC ATGCCACCGG CAATCCTTCG ATCTTCATCA TCGACCTGTC CAGAAAGCCG
AGCGATTATC CGACCGAGAA GCCTTGGACC GAGGGCACCA ACTTCTGGCG CATTGAGCTT
CCCCAAAGCA GCACCACTAT CGCCAAAGGC CTACTTGGGC TGACCACGGT GAAGAACTTC
CAGACTGGCG CGGTTGATAG TCTGTATGCT GGGGATATGC AGGGCAACGT CTGGAAGCTT
GACTTCACGC TGCGGGGCAC CGGCAGCTTG ACTACCGACG CTACCACCAA CTTGACGGCA
TTCAACGCCA AAACCGGAAC CAGCACTGCA TTTTTCGTCG CCAAAGACAG CAACGGGGCA
CTGCAGCCCA TCACCGGCGA GCCCGTTGTC ATCAACGCTT TTTTCGACAG CAAGCTGGTG
TCCTTTGGTA CCGGGAAATA CCTGGAGACA CCGGACACCA CCGTGCCGAT GACCGTGGGC
GCTTCGTTTT ATACGCTGCT AGACAACACG CAAGCCGTTA CCGGACGCTC GGTCTTGCAG
CAAGGCAGCG TTTCGACCAC TGGCACTGTC ACGATCCCAA GTTTTGTCTA TGGAAAGCCC
ACCACAGCCG CCCCCGCATT GAGAATGGGT TGGTATATAG ATTTTGACAA GAGCATTGGC
GAGCGCCAGA TCAGCGATAT AACCGCCGAT TTTGGTCAGC TGTTTTTTGG TTCCCTTTTC
CCCACAAAGG GCTCATGCGG CGAGGGCGGG GGTCGGTTCT ATGCTGTGAA CTCACTCACG
GGTAACGGGA TGTCCGAGTT GTCGCAGGTT GGCATATTGG CCGCACCCCT GGTTTTGGAA
GTCGGCAGCA CGGGGCTTAC CTTGAGTGAC ACCAGTGGTC AGCGAACAGC AACCCGCAAC
GTGGCTATCA TCACACAGGG ATCCAAGGGT CTTAAGGTTG CTGCCACTGG ACTCACCTAC
AAGGACCAGG TAGGACGACT GAGCTGGCGC CAGATCAACA ACTTCCGGGA AAACAAGAAT
AACTAA
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| Protein sequence | MNFRILFSSP SSKSSKKKWG VRLALLAAFS AITVGVVISQ TITLPPLVVL PAEPLYMNGA
KTKGNLTLAL SVEFPTVGQT YRDDFDSTKE YVGYFDPKAC YRAVLSSGSL GNYFDWQTNK
GTFSATCPSS QFDGNFMNWA TSSAIDIMRY GLTGGNRTID DSNTTVVDRA WLPDNFYKNS
SYFSEKFVPN AQLSGRTENS PTSFPNGMWI YNCKNRVYFA DAQDSGTSCD SPFGVSGAQS
EHLIKANANN KGNFYEVRNL VCDPNSATNR LMTYDPDTKK WTGLCYRYPN GKYKPVGQFQ
MNADNLRVSV LGYLQDDNRS RYGGVLRAPL KYLGPKNYDT NFNLLTAANA RSEWDATTGV
FVANPQSGDS TYGDQGFGQS GVINYVNKFG TLNPDSIGEY KTYDPLSELY YEAIRYLQGK
QPTAQAITNV SGSTSSKALQ ENFPVYKTWT DPFAGFTDTT DTGKGCLRNS ILTIADVFTH
SDRSLPGNTL GTSTDDFVRS VETNPALDVP FWTSVVGSFE SKTTSTATVT YSDSQGLTQT
AGNLATNKLY DASTSYDLSN AATVSTGAGT GSYYMAGLAY WANTQSFRTD LPKGRIKTYS
IDVNENRASD NVDFRRTRQL YLGAKYGGFD DSATGNTGNP YTGGTNVLWQ GTDGEAKNYF
LVSDAKKFLD SLAEVFARVV EETGSIAGGA ISTQRLTAGQ AEAVFQARFN PVANFWSGRL
IKFPLTLDTA GTGLVIGNTP TWEAGQVLTA ATLVDHGAAR NIVIGAPIGL QATVLPTPFK
WADLAQAHKD ALNISPYGVP APVVDTLGPD RLNYLRGDRS KEITPSTPLG PFRPRDIVMG
DIVNSGLVYM GKPSGSITGT DYNTFYAANK SRSPVIFANA NDGMLHAFYD STGAEAFAYI
PGFVAGKLNQ LPDQDYSHIS INDATPAVSE AYIGGQWRSV LVSGVGGGGQ GLYALDVTNP
ATFTKDNVLW EFTDRDHVAM GNVLGTPQIV KLRTTNNGVT PVGYKWYAVV ASGINNYAAD
GYAHATGNPS IFIIDLSRKP SDYPTEKPWT EGTNFWRIEL PQSSTTIAKG LLGLTTVKNF
QTGAVDSLYA GDMQGNVWKL DFTLRGTGSL TTDATTNLTA FNAKTGTSTA FFVAKDSNGA
LQPITGEPVV INAFFDSKLV SFGTGKYLET PDTTVPMTVG ASFYTLLDNT QAVTGRSVLQ
QGSVSTTGTV TIPSFVYGKP TTAAPALRMG WYIDFDKSIG ERQISDITAD FGQLFFGSLF
PTKGSCGEGG GRFYAVNSLT GNGMSELSQV GILAAPLVLE VGSTGLTLSD TSGQRTATRN
VAIITQGSKG LKVAATGLTY KDQVGRLSWR QINNFRENKN N
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