| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2642 |
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| Symbol | |
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| ID | 3960778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2907070 |
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| End bp | 2909040 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637917460 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_523889 |
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| Protein GI | 89901418 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.482586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTCA AACCCACCAA CGAATACTCT GAAGCCTCGA TCCGTGTGCT GAAAGGGCTG
GAGCCCGTCA AGCAGCGCCC GGGCATGTAC ACCACCACCG ACACGCCGCT GCATGTGATC
CAGGAGGCGC TCGACAACGC CGCTGACGAG GCGCTGGCCG GGCATGGCAA GAAGATCAGG
GTGGTACTGC ACCTTGACGG CTCGGTCAGC ATCGAGGACG ACGGCCGCGG TATTCCGTTT
GGCCTGCACC CGACGGAAAA CGCCCCGGTG ATCGAGCTGG TGTTCACACA ACTGCACGCC
GGTGGCAAGT TTGACAAGGG CAAGGGCGGC GCCTACAGCT TCTCGGGCGG CTTGCATGGC
GTGGGGGTGA GCGTCACCAA CGCGCTGGCG ACGCGGCTGG AGGCCACCAC TTACCGGGAG
GGCAAGGTCG CCAGTCTGGT GTTTGCCGGC GGTGACGTGA TTGAGCCTTT GAGAGTGCGG
GAACCCGCAC CCGGTGAGCG CAAGTCCGGC ACCACGGTGC GGGTCTGGCC GGACGCCAAA
TATTTTGAAA CACTGGCGCT GCCGATGGCG CAACTGGTGC ATCTGCTGCG CAGCAAGGCG
GTGCTGATGC CGGGCGTCAC CGTGACGCTG GTCAACGAGA AAACCAAAGA GACGCAAAAC
TGGCTGTTCA AGGGCGGTCT GCTGGACTAC CTGATGCAAA CCCTGGCCGG CGAGCTGGTG
ATCCCGGTGT TCGAGGGTGA TGGGTTTGCC GACGCCCAGC ATGACAATTT TGCCGAAGGC
GAGGGCGCCT CCTGGTGCGT CGCCTTCACC GAGGACGGCC CTTTGGTGCG TGAAAGCTAT
GTCAACCTGA TCCCCACCAC GGCTGGCGGC ACGCACGAGG CGGGCTTGCG CGACGGTCTG
TTCACGGCGG TCAAGAGCTT TATCGAGCTG CATTCGCTCT TACCCAAAGG TGTGAAGTTG
ATGCCCGAAG ACGTGTTCGC CCGCGCCAGC TACGTGTTGT CGGCCAAGGT GCTGGACCCG
CAGTTTCAGG GCCAGATCAA GGAGCGGCTG AACTCGCGCG ACGCGGTGCG GCTGGTCTCA
AACTATGTGC GCCCGGCGCT GGAGCTGTGG CTGAACCAGC ATGTGGAGTA CGGCAAGAAG
CTGGCGGAGC TGGCGATCAA GGCGGCGCAG ACGCGTCAGA AAGCCGGTCA GAAGGTCGAG
AAACGCAAGG GCTCGGGTGT GGCCGTGCTG CCGGGCAAGC TGACCGATTG CGAAAGCCGC
GACCTGGCCT ACAACGAGGT GTTTCTGGTC GAGGGCGACT CGGCCGGCGG CAGCGCCAAG
ATGGGGCGCG ACAAAGAGAG TCAGGCGATT TTGCCGCTGC GTGGCAAGGT GCTCAACACC
TGGGAAGTGG AGCGCGACCG CCTGTTTGCC AATAATGAAA TCCACGATAT TTCGGTGGCG
ATTGGCATCG ATCCGCATGG CCCCAATGAC ACGCCCGACC TGAGCGGGCT GCGCTACGGC
AAGGTCTGCA TCTTGTCGGA TGCCGATGTG GACGGTTCAC ACATCCAGGT GTTGCTGCTG
ACGCTTTTTT TCAAGCATTT CCCGAAGCTG ATCGAGACCG GCCGTATTTT TGTGGCCCGG
CCGCCTTTAT TTCGTGTCGA TGCGCCCGCG CGTGGCAAGA AGCAAGCCTC CAAGGCCTAC
GCGCTCGATG AGGGCGAACT GACTGCCATT CTGGACAAAC TGCGCAAGGA AGGCGTGCGC
GAAGGCGCCT GGAGCATCAG CCGCTTCAAG GGCCTGGGGG AAATGAATGC CGAGCAGCTG
TGGGACACCA CCCTCAACCC CGATACCCGG CGCTTGTTGC CGGTGCACCT GGGCAGCATC
GACTTTTTGC AAACGCAAGG CCTGTTCACC CAACTGATGG GCAAGGGTGA GGCCGCTGCC
CGACGTGAGT TGATGGAATT GCACGGCGAT GCGGTGGAGA TTGATATCTA A
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| Protein sequence | MALKPTNEYS EASIRVLKGL EPVKQRPGMY TTTDTPLHVI QEALDNAADE ALAGHGKKIR
VVLHLDGSVS IEDDGRGIPF GLHPTENAPV IELVFTQLHA GGKFDKGKGG AYSFSGGLHG
VGVSVTNALA TRLEATTYRE GKVASLVFAG GDVIEPLRVR EPAPGERKSG TTVRVWPDAK
YFETLALPMA QLVHLLRSKA VLMPGVTVTL VNEKTKETQN WLFKGGLLDY LMQTLAGELV
IPVFEGDGFA DAQHDNFAEG EGASWCVAFT EDGPLVRESY VNLIPTTAGG THEAGLRDGL
FTAVKSFIEL HSLLPKGVKL MPEDVFARAS YVLSAKVLDP QFQGQIKERL NSRDAVRLVS
NYVRPALELW LNQHVEYGKK LAELAIKAAQ TRQKAGQKVE KRKGSGVAVL PGKLTDCESR
DLAYNEVFLV EGDSAGGSAK MGRDKESQAI LPLRGKVLNT WEVERDRLFA NNEIHDISVA
IGIDPHGPND TPDLSGLRYG KVCILSDADV DGSHIQVLLL TLFFKHFPKL IETGRIFVAR
PPLFRVDAPA RGKKQASKAY ALDEGELTAI LDKLRKEGVR EGAWSISRFK GLGEMNAEQL
WDTTLNPDTR RLLPVHLGSI DFLQTQGLFT QLMGKGEAAA RRELMELHGD AVEIDI
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