| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2641 |
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| Symbol | |
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| ID | 3960777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2904575 |
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| End bp | 2906965 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917459 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_523888 |
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| Protein GI | 89901417 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.122568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC AAACCACCCT GGATTTTCCC GCTGGCCCTG ATGCGGGCGC TGGCGCCGAC
GATGACGCCC TGAATCTGGC CACCTACGCG CAGCGTGCTT ATCTTGAATA CGCCCTGAGC
GTGGTCAAGG GCCGCGCCTT GCCCGATGTC TGCGACGGCC AGAAACCGGT GCAGCGGCGC
ATTTTGTATT CCATGTCGCG CATGGGGCTG GGCTTTGGCG GTCCCAACGG TAATACTGGG
GCCAAGCCGG TCAAATCTGC TCGCATAGTC GGTGACGTGC TGGGGCGCTT TCACCCGCAT
GGGGACTCAT CGGTGTATGA CGCTGCGGTG CGCATGGCGC AGGACTTTTC ACAGCGCTAC
CCGCTGATTG ATGGGCACGG CAACTTTGGC TCGCGTGACG GCGACGGCGC CGCGGCCATG
CGTTACACCG AGGCGCGGCT GGCCAAAATC ACCGGCCTGC TGCTCGATGA GATCGACGAG
GGCACGGTTG ACTTCATGCC CAACTACGAC GGCTCGACGC AAGAGCCGAG CCAGTTGCCC
GCGCGCTTGC CGTTCAATCT GCTCAATGGC GCCAGCGGCA TTGCGGTCGG GCTGGCCACC
GAAATCCCGA GCCACAACCT GCGCGAGGTG GCCGATGCCT GCATCGCGCT GATCAAGTCG
CCCCAGCTCA GCGAGTCGGA TTTGTTTGCC TTGATTCCCG GCCCGGACTA CCCCGGCGGT
GGCCAGATCA TCAGCAGTGC CGAGGACATC GCCGAGGCTT ATCGCAGCGG GCGGGGTTCA
CTCAAATGCC GGGCGCGCTG GAAGATTGAA GACCTGGCGC GCGGCCAGTG GCGTCTGGTG
CTGACCGAGT TGCCGCCGGG GGTCAGCACG CAACGGGTGC TGGAAGAGAT TGAAGAGCTG
AGCAACCCCA AAGTCAAGGC TGGCAAAAAA GCGCTCTCGC TGGAGCAAAA CCAGCTCAAG
GCGACGCTGC TGTCGGTGCT CGACGGGGTG CGCGACGAAT CCAGCAAAGA CGCCGCCGTG
CGTCTGGTGT GCGAGCCCAA GACCAGTCGC ATCAGCCAGC AGGAGTTGAT CACCACGCTG
CTGGCGCACA CCAGCCTGGA GACTTCATCG CCGATCAATC TCACCATGAT TGGGCTCGAC
GGCCGTCCAA CGCAAAAGTC CTTGCGCCAG ATGCTCACCG AGTGGATAGC ATTCCGCCAG
AAAACCATCG AGCGGCGCTC ACAGCATCGC TTGGGCAAGG TGCTCGATCG CATTCACATT
CTGGAAGGGC GCGCGCTGGT GCTGCTCAAC ATTGACGAAG TGATTGCCAT CATTCGCCAG
GCCGACGAGC CCAAGGCGGC GCTGATTGCC AGGTTCCATC TGTCGGATCG GCAGGCCGAA
GATATTCTGG AAATCCGCTT GCGCCAATTG GCCCGCCTGG AGGCCATCAA GATTGAGCAG
GAGTTGGCCG GATTGCGTGG CGAACAGCAG AAGCTGGAGG AAATTCTGGG CAGCCCGAGT
GCGTTGCGCC GCCTGATGAT CAAGGAGATC GAGGCGGATG CCAAAACCTT TGCCGACCCG
CGCCGGACAT TGATCCAGGC CGAGAAAAAA GCGGTGCTCG AAGTCAAGGT GGTCGATGAG
CCCGTGACCG TGGTGGTGAG TCAAAAAGGC TGGGTGCGTG CCCAAAAGGG CTGGGCCAGC
GAGCGTGCTG CCAACGGTGT GCTGCCTGCG GAATACAGCT TCAAGGCCGG CGACGCGCTC
TACGACACCT TCGAGTGCCG CACGGTGGAC ACGCTGCTGG CCTTTGGCAG CAACGGGCGG
GTCTATTCAG TGGCGGTGGC CTTGTTGCCA GGCGCCCGCG GTGATGGCCA GCCGATGACC
AGCCTGCTGG AACTCGAGGC GGGCACCCAG CTGCTGTACT ACTTTGCCGG CCCGGCCCCG
GCGACGCTGC TGCTCAGCAG CTCGGGCGGC TACGGTTTTC TGGCTTCGGT GGAAAACATG
ACATCGCGCC TGAAAGCGGG CAAAGCCTTT GTCACTTGCA ATGCAGGTGA AATTTTGTGC
CGGCCGTCGC CGGTGGCGGG GGGCTCTGGA GCAACGCCCT GGCCGGCCGC CACGCATGTG
GCCTGTGCCT CGGCGGGTGG GCGCATTTTG ACCTTCGAGA TCAGCCAGCT CAAGACCATG
GCCACCGGCG GGCGCGGGCT GATGCTGATT GATCTGGAAG ACAAGGACAG GCTGGCCGGT
GCTTGCGCCT ATACCCGCAG TGTCAAGATT GAAGGTTTGG GCCGAGGCGG CAAGCCGCGT
GATGAAACGC TGGAAATCCG CAGCCTCAAC AACGCCCGGG CGCTGCGCGG GCGCAAAGGC
AAGGTGGCCG ATCTGGGCTT CAAGCCAGCC ACGATCACAC GCGTCGCCTG A
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| Protein sequence | MSDQTTLDFP AGPDAGAGAD DDALNLATYA QRAYLEYALS VVKGRALPDV CDGQKPVQRR
ILYSMSRMGL GFGGPNGNTG AKPVKSARIV GDVLGRFHPH GDSSVYDAAV RMAQDFSQRY
PLIDGHGNFG SRDGDGAAAM RYTEARLAKI TGLLLDEIDE GTVDFMPNYD GSTQEPSQLP
ARLPFNLLNG ASGIAVGLAT EIPSHNLREV ADACIALIKS PQLSESDLFA LIPGPDYPGG
GQIISSAEDI AEAYRSGRGS LKCRARWKIE DLARGQWRLV LTELPPGVST QRVLEEIEEL
SNPKVKAGKK ALSLEQNQLK ATLLSVLDGV RDESSKDAAV RLVCEPKTSR ISQQELITTL
LAHTSLETSS PINLTMIGLD GRPTQKSLRQ MLTEWIAFRQ KTIERRSQHR LGKVLDRIHI
LEGRALVLLN IDEVIAIIRQ ADEPKAALIA RFHLSDRQAE DILEIRLRQL ARLEAIKIEQ
ELAGLRGEQQ KLEEILGSPS ALRRLMIKEI EADAKTFADP RRTLIQAEKK AVLEVKVVDE
PVTVVVSQKG WVRAQKGWAS ERAANGVLPA EYSFKAGDAL YDTFECRTVD TLLAFGSNGR
VYSVAVALLP GARGDGQPMT SLLELEAGTQ LLYYFAGPAP ATLLLSSSGG YGFLASVENM
TSRLKAGKAF VTCNAGEILC RPSPVAGGSG ATPWPAATHV ACASAGGRIL TFEISQLKTM
ATGGRGLMLI DLEDKDRLAG ACAYTRSVKI EGLGRGGKPR DETLEIRSLN NARALRGRKG
KVADLGFKPA TITRVA
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