Gene Rfer_2636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2636 
Symbol 
ID3960772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand+ 
Start bp2899355 
End bp2899975 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content58% 
IMG OID637917454 
ProductLuxR family transcriptional regulator 
Protein accessionYP_523883 
Protein GI89901412 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTAC GATACTACTT AACTTCATAC GTAGTTTTTC GTAAAGTACA AACCCTAAGT 
CCTGGTCACC CACAACGCAT GGATATTAAT TACCGTCTTG CCTTCGATCT GGCGCCAGTC 
GGCCTCGCCC TCTCAAGCAA CCGCAGCATG CTGGACTGCA ACCGCCATCT GTGCGAGATG 
TTTGGTGCCT CACGTGAATT ATTGGTGGGT CAGTCATTTC AGGTGCTGTA CCCCAGCGCC 
ATTGAATTTG AGCGCACCGG ATCGCGCATT GCGCCGATTC TGAACCGCAA CGGCACCTAC 
GCCGACGACC GCATCATGAA GCGCGCCAAC GGCGAAACCT TCTGGTGCCA CGTGACCGGC 
CGCGCGCTGA ACCCGAGCGC GCCGCATGAG ACTGGCATCT GGACCTTTGA GGACTTGAGT 
TCGCGTCGCC CGGTCAAGGC GGAGTTGACG GCACGTGAAC GCGAGGTCGC GGCACACCTG 
ATGGACGGAT TGACCAGCAA GGAAATAGGC AAGACGCTGG CGATCAGCCA CCGCACGGTT 
GAAATCTACC GAGCCCGTCT GATGCGCAAG TACACAGCCT CCAACACCGG GGACCTGGTG 
CACAAGCTGA TGGCGGGTTG A
 
Protein sequence
MTLRYYLTSY VVFRKVQTLS PGHPQRMDIN YRLAFDLAPV GLALSSNRSM LDCNRHLCEM 
FGASRELLVG QSFQVLYPSA IEFERTGSRI APILNRNGTY ADDRIMKRAN GETFWCHVTG 
RALNPSAPHE TGIWTFEDLS SRRPVKAELT AREREVAAHL MDGLTSKEIG KTLAISHRTV 
EIYRARLMRK YTASNTGDLV HKLMAG