Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2621 |
Symbol | |
ID | 3963399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2884192 |
End bp | 2885091 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917439 |
Product | periplasmic binding protein |
Protein accession | YP_523868 |
Protein GI | 89901397 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGCG TTTTACTACT GTTAATGCTG CTGGTCTCGC ACGCAGCTCA AGCCTTCCAG GTCGTTGATG ACAGAGGCAT CAAAGTTACC TTTGCACAAG CGCCCCAGCG CATCGTCAGC CTGCTGCCGT CGCTGACTGA AACCGTGTGC GCACTGGGGC AATGCGCCAG GCTGGTCGGT GTGGACCGCT ATTCCAATTA CCCCGAAAGC GTCAAAAACC TGGCCCAAGT CGGCGGCGGG CTGGACCCCA ACATTGAGGC CATTGTGGCG CTCAAGCCGG ATCTGGTGCT GATGGCCACC TCGTCGCGTG TGGGTGAGCG GCTGCAGTCG CTGGGCATCA ACGTGGTGGC GCTGGAGCCC AAAACCCATG CCGATGTGAA GCGTGTGCTT GAAAAAATCG GCCAGGTGTT GGCGGTGACT GACGCGCAAA GCATCTGGCG CACCATTGAC GCCGCCATCT CGGCCGCAGC GCAGTCCTTG CCCAAAAGCG TCGCCTCGAC GCGGGTTTAT TTTGAGGTGA ACCCCGGTCC CTACGGCGCG GGCGAGTCGT CCTTCATCGG CGAGACGCTC ATCCGGCTGG GGGTTAAAAA CATCATTGGA CCCAAGCTGG GGCCGTTCCC CAAGCTCAAC CCTGAATTTG TGGTGCGCGC CAACCCGGAT GTGATCATGA TTGGTCAGCG CAGCGCGGGC AGCATGGCGC AGCGCCCGGG CTGGCAGAGT TTGCGGGCCT TGCGTGAACA TCGCTTGTGT GTGTTTACCA CCGATCAGTC AGACGTGCTG GTGCGTCCCG GCCCACGCAT GGCCGAAGGT GCGCGGCTGA TGGCGCAGTG CCTGGCTGAC AAAGCGGGGG CTGTCAAAAC GACCGCGCCC TGGCTCAAAA CCGGGCCCGC CAAACCGTGA
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Protein sequence | MKSVLLLLML LVSHAAQAFQ VVDDRGIKVT FAQAPQRIVS LLPSLTETVC ALGQCARLVG VDRYSNYPES VKNLAQVGGG LDPNIEAIVA LKPDLVLMAT SSRVGERLQS LGINVVALEP KTHADVKRVL EKIGQVLAVT DAQSIWRTID AAISAAAQSL PKSVASTRVY FEVNPGPYGA GESSFIGETL IRLGVKNIIG PKLGPFPKLN PEFVVRANPD VIMIGQRSAG SMAQRPGWQS LRALREHRLC VFTTDQSDVL VRPGPRMAEG ARLMAQCLAD KAGAVKTTAP WLKTGPAKP
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