Gene Rfer_2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2621 
Symbol 
ID3963399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2884192 
End bp2885091 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content62% 
IMG OID637917439 
Productperiplasmic binding protein 
Protein accessionYP_523868 
Protein GI89901397 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGCG TTTTACTACT GTTAATGCTG CTGGTCTCGC ACGCAGCTCA AGCCTTCCAG 
GTCGTTGATG ACAGAGGCAT CAAAGTTACC TTTGCACAAG CGCCCCAGCG CATCGTCAGC
CTGCTGCCGT CGCTGACTGA AACCGTGTGC GCACTGGGGC AATGCGCCAG GCTGGTCGGT
GTGGACCGCT ATTCCAATTA CCCCGAAAGC GTCAAAAACC TGGCCCAAGT CGGCGGCGGG
CTGGACCCCA ACATTGAGGC CATTGTGGCG CTCAAGCCGG ATCTGGTGCT GATGGCCACC
TCGTCGCGTG TGGGTGAGCG GCTGCAGTCG CTGGGCATCA ACGTGGTGGC GCTGGAGCCC
AAAACCCATG CCGATGTGAA GCGTGTGCTT GAAAAAATCG GCCAGGTGTT GGCGGTGACT
GACGCGCAAA GCATCTGGCG CACCATTGAC GCCGCCATCT CGGCCGCAGC GCAGTCCTTG
CCCAAAAGCG TCGCCTCGAC GCGGGTTTAT TTTGAGGTGA ACCCCGGTCC CTACGGCGCG
GGCGAGTCGT CCTTCATCGG CGAGACGCTC ATCCGGCTGG GGGTTAAAAA CATCATTGGA
CCCAAGCTGG GGCCGTTCCC CAAGCTCAAC CCTGAATTTG TGGTGCGCGC CAACCCGGAT
GTGATCATGA TTGGTCAGCG CAGCGCGGGC AGCATGGCGC AGCGCCCGGG CTGGCAGAGT
TTGCGGGCCT TGCGTGAACA TCGCTTGTGT GTGTTTACCA CCGATCAGTC AGACGTGCTG
GTGCGTCCCG GCCCACGCAT GGCCGAAGGT GCGCGGCTGA TGGCGCAGTG CCTGGCTGAC
AAAGCGGGGG CTGTCAAAAC GACCGCGCCC TGGCTCAAAA CCGGGCCCGC CAAACCGTGA
 
Protein sequence
MKSVLLLLML LVSHAAQAFQ VVDDRGIKVT FAQAPQRIVS LLPSLTETVC ALGQCARLVG 
VDRYSNYPES VKNLAQVGGG LDPNIEAIVA LKPDLVLMAT SSRVGERLQS LGINVVALEP
KTHADVKRVL EKIGQVLAVT DAQSIWRTID AAISAAAQSL PKSVASTRVY FEVNPGPYGA
GESSFIGETL IRLGVKNIIG PKLGPFPKLN PEFVVRANPD VIMIGQRSAG SMAQRPGWQS
LRALREHRLC VFTTDQSDVL VRPGPRMAEG ARLMAQCLAD KAGAVKTTAP WLKTGPAKP