Gene Rfer_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2613 
Symbol 
ID3962609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp2877866 
End bp2878309 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID637917431 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_523860 
Protein GI89901389 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTACCA TCACACGAAA AATGGAATTC GATGCCGGTC ATCGCATTCC CGACCACAAG 
AGCCAGTGCC GAAACATGCA CGGCCACCGC TACACCCTGC TCATCACCCT GACCGGTGAT 
GTGGTGCAAC AAGAGGGCGA ATCCGACAAC GGCATGATCA TGGATTTTGG CGACATCAAG 
GCGCTGGCCA ACCAGCACCT GGTCAAGCTC TGGGACCACG CCTTCATCGT CTACGCGCAC 
GACACCGTGG TGCGTGATTT TCTGGACAGC ATGCCGAACC ACAAAACGGT GGTCATTGAT 
CGCGTGCCCA CGGTCGAAAA TCTGGCCAAG ATTGCCTTCG ATATCTTGAA GGAGGTCTAC 
CACGGCCGCT ACGGCAGACA TCTGTCGCTG GCCAAGGTCA CCCTGTATGA AACGCCCAAT 
TGCTGGGCTG AGATCGACGG CTAG
 
Protein sequence
MLTITRKMEF DAGHRIPDHK SQCRNMHGHR YTLLITLTGD VVQQEGESDN GMIMDFGDIK 
ALANQHLVKL WDHAFIVYAH DTVVRDFLDS MPNHKTVVID RVPTVENLAK IAFDILKEVY 
HGRYGRHLSL AKVTLYETPN CWAEIDG