| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2608 |
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| Symbol | |
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| ID | 3962604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2872320 |
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| End bp | 2873462 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917426 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_523855 |
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| Protein GI | 89901384 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA TCGACCCCCG CACGGTTCTC CTGCTGACTG GCATCATGGG CGGTTTGATG
TCGCTGGTAC TGTATTCGCT CAAGCGCAAT TACCCGGCCT CCATCGAGGG CCTGGGTGAC
TGGTCGGCGG CCTTGCTGCT TTTGTTTGCG GGTGGCCTGC TGGTGGCCGG GCGCGGCAAA
TTGCCGAACG TCGTTTCCAT CTCAGTTTCC AGCTTTTTGC TCTGGTCCGG GCTTTATCTG
GCTTACGTTG GCAGCCAGCG CTTCTTTGGC GTCAAGCCTC GCATAGCGCC CTGGATGGCA
CTGATCACGG GCTTGGCGCT GGTCCAGCTG TGGTTTTCCG TGGTCGAGCC GAGTTACCAC
ATGCGCCTGG TTCTGACCAC CGTGGCGACG GCTTGCCTGT CCGGGGTGCA TGCCTGGCTT
GTATTCAGGC AGGGTTCAAT CACATTTTCC CGGGGACTGG CTGTTGGCGT GCTGGTGTTC
CTCTTTGGCG CGCAGGTCAT GCGCCTGGTG ACCTCGTTCT CCGCGCCCTT TCCGCTCAAT
GCCGAATTTT TTGACACCTC AACCCTTCAG CTGACCTACA TCACCAGCTT CGCTTTTTCC
GTTCTACTGT TCTCCATCAG CGCGGTGCTG ATGGCCACCG ACCGCTTGCG TATTGAACTG
GAGCACTTGG CCAATCACGA TTCACTCACC AACGCCCTGA CCCGCCGGCA CATGGACGAC
GCTTGTCGGT CCGAGTTGGA GCGCTGCCGC CGTCATGGCC ACAGCATGGC CTTGCTGATC
ATGGATCTGG ATCATTTCAA AGAGATAAAT GACATTTATG GCCACCAGGC GGGCGACCAG
GCCCTGATCA ACTTTGTGGC CAGAGTCAAC GCCTTGTTGC GTGGGCCTGA CCAACTGGGA
CGCTTTGGCG GCGAAGAGTT TGTGGCGCTT TTGCCGGAGA CCTCGCTGGA CGAAGCCATT
GCTGTGGCCG AGCGAATTCG CGGCGCCTGC ACCCTGGCCG GGCAGGCCCC CGCGTGTACC
GTGAGCATTG GCGTCACCAC AAACCGAAAG GACAATGACA GCGTAGACAC GCTGCTGGCG
CGCGCCGACG CTGCGCTGTA CCGCGCCAAG GCCGCCGGAC GCAACCGGGT GGAGGTGGCC
TGA
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| Protein sequence | MSAIDPRTVL LLTGIMGGLM SLVLYSLKRN YPASIEGLGD WSAALLLLFA GGLLVAGRGK
LPNVVSISVS SFLLWSGLYL AYVGSQRFFG VKPRIAPWMA LITGLALVQL WFSVVEPSYH
MRLVLTTVAT ACLSGVHAWL VFRQGSITFS RGLAVGVLVF LFGAQVMRLV TSFSAPFPLN
AEFFDTSTLQ LTYITSFAFS VLLFSISAVL MATDRLRIEL EHLANHDSLT NALTRRHMDD
ACRSELERCR RHGHSMALLI MDLDHFKEIN DIYGHQAGDQ ALINFVARVN ALLRGPDQLG
RFGGEEFVAL LPETSLDEAI AVAERIRGAC TLAGQAPACT VSIGVTTNRK DNDSVDTLLA
RADAALYRAK AAGRNRVEVA
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