Gene Rfer_2607 details

Gene Information

• Locus tag: Rfer_2607
• ID: 3962603
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2871652
• End bp: 2872305
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637917425
• Product: endonuclease III
• Protein accession: YP_523854
• Protein GI: 89901383
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0177] Predicted EndoIII-related endonuclease
• TIGRFAM ID: [TIGR01083] endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACCTG CCGCCATCGA ATCCTTTTTT GCCACCCTGA AGGCGGCCAA CCCCCATCCG 
CAGACCGAGC TGGCATACGC CAGCGTGTTT GAGCTGCTGG TCGCCGTGCT GCTGTCAGCC 
CAGGCCACGG ATGTCAGCGT CAACAAAGTC ACGCGCCGCC TTTTTCTGGT GGCCAACACG 
CCGCAGAAGA TGCTGGACCT GGGCCTGGAG GGGCTGGAAG AGCACATCAA GACCATTGGC 
CTGTACCACG CCAAGGCCCG CCACCTGATG CAAACCTGCC GGATGCTGGT GGATCAATAC 
GGCGGCGCGG TGCCGCGCAC GCTTGAGGCG CTGCAGACCC TGCCGGGTGT GGGGCGCAAA 
ACCGCCAACG TCATCCTGAA CGTCGCGTTT GGCGAGCCCA CCATGGCCGT GGACACTCAT 
CTCTTTCGCG TCGCCAATCG CACCGGTCTG GCGCCGGGCA AAACGCCGTA TGAGGTGGAG 
ATGAAGCTGC TCAAACGCAT TCCAGCCGAG TACCTGGTCG ACGCGCACCA CTGGCTGATT 
CTGCATGGGC GCTATGTGTG CCAGGCGCGC AAGCCGCTGT GTTGGCAGTG CGCCGTGAGC 
GCCTTTTGCG ACTTCAAGCC AAAGACGCCT CCTGACAAGG CGCGAGCGCG CTGA 

 

Protein sequence

MTPAAIESFF ATLKAANPHP QTELAYASVF ELLVAVLLSA QATDVSVNKV TRRLFLVANT 
PQKMLDLGLE GLEEHIKTIG LYHAKARHLM QTCRMLVDQY GGAVPRTLEA LQTLPGVGRK 
TANVILNVAF GEPTMAVDTH LFRVANRTGL APGKTPYEVE MKLLKRIPAE YLVDAHHWLI 
LHGRYVCQAR KPLCWQCAVS AFCDFKPKTP PDKARAR