Gene Rfer_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2582 
Symbol 
ID3961990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2843972 
End bp2845153 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID637917401 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_523830 
Protein GI89901359 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID[TIGR00773] Na+/H+ antiporter NhaA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAG TTATTGCCCG CCGCATCGAT CAGTTCATCA ATTCACAGTC GGCCGGTGGC 
GTGCTGCTGG CTCTGTCTGC ATTGGTTGCG CTGGTGATCA GCAATTCACC CTGGCGCTCT
TATTACCAGC AGTTCTTGCA GATTCCCGGC TCGGTGAAGA TGGGTGCAGA CTGGCTGCTG
CTATCAAAGC CGATGCTGAT CTGGATCAAT GATTTGTGGA TGGCGGTGTT CTTCTTCCTG
GTCGGCCTGG AGATCAAGCG CGAGTTGCTC AACGGTGAAT TGGCTTCGCT CAAGCAGGCG
ATGCTGCCGG CCGTTGCCGC GCTGGGCGGC ATGGCGGTGC CAGCGCTGAT TTATGCCGCC
ATCAACTGGG GCGAGCCGGT GGGCTTGCGC GGTTGGGGGA TCCCCATGGC CACCGACATT
GCGTTTGCCT TGGGGCTTTT GGTGCTCCTG GGTAGCCGCG TGCCGACCTC CCTCAAGGTG
TTTTTGACGG CGGTCGCCAT CATTGATGAC CTGGGCGCCA TTTTGGTGAT TGCATTTTTT
TACACGGATA ACCTGTCGCC CACCATGCTG CTGGCAGCTG GACTTGGCGC GCTGGTGCTG
CTGGGGCTGA ATCGGGCCCG GGTGATGGCG GTCGGGCCGT ATGTGGTGGT CGGGCTGGTG
ATTTGGGTTT GCGTGCTCAA GTCGGGTATT CATGCCACGC TGGCGGGTGT GATCACGGCG
CTGGCGATTC CGCTGGCAGA TGGCAAGGGC GGCTCACCAC TGGAACGAGC TGAGCACGCC
CTGCAGCCAT GGGTGGCATT CCTGGTGTTG CCGGTGTTTG CCTTTGCCAA TGCGGGTGTG
TCATTGCAAG GGGTGACGCT GGCTACTTTG ACCCAAACGG TGCCGCTGGG CATTGCGTTT
GGCTTGCTGA TTGGTAAACC CATCGGCGTT TTTGGTGCGT CCTGGTTGTT GATCCGCTTG
ACCGATGCGC AGTTGCCCGA TCAATGTCGC TGGAGTCAGT TTTTTGGGGT CTGCGTATTG
TGTGGGGTGG GCTTTACCAT GAGCCTGTTC ATTGGTTCGC TGGCGTTTGA AGGGGCTGAT
GCGGCGTATG AAGTCCAGGT CAAAATCGGC GTCCTGCTGG GGTCATTGCT CAGTGGAGCG
GCCGGTGTCG CGCTGCTGTT GGCAAGCCGC AAAGCAGTCT GA
 
Protein sequence
MLKVIARRID QFINSQSAGG VLLALSALVA LVISNSPWRS YYQQFLQIPG SVKMGADWLL 
LSKPMLIWIN DLWMAVFFFL VGLEIKRELL NGELASLKQA MLPAVAALGG MAVPALIYAA
INWGEPVGLR GWGIPMATDI AFALGLLVLL GSRVPTSLKV FLTAVAIIDD LGAILVIAFF
YTDNLSPTML LAAGLGALVL LGLNRARVMA VGPYVVVGLV IWVCVLKSGI HATLAGVITA
LAIPLADGKG GSPLERAEHA LQPWVAFLVL PVFAFANAGV SLQGVTLATL TQTVPLGIAF
GLLIGKPIGV FGASWLLIRL TDAQLPDQCR WSQFFGVCVL CGVGFTMSLF IGSLAFEGAD
AAYEVQVKIG VLLGSLLSGA AGVALLLASR KAV