| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2581 |
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| Symbol | |
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| ID | 3961989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2841863 |
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| End bp | 2843860 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637917400 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_523829 |
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| Protein GI | 89901358 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.322874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAC CATCAACCGC CGTTGAATCC ACATTGGTTG AAAACCGTGT TTTCCCGCCG
AGCGAGGCGA CCGTCAAGGC CGCGCGCATT TCCGGCATGG ACGGCTACAA CGCGCTGTGC
GCCGAAGCCG AGAAAGATTT TGAAGGCTTC TGGGCTCGCC TGGCACGCGA AAACGTGGTC
TGGACCAAAC CTTTCACCAA AACCCTCGAC GAGTCCAATG CACCGTTTTA CAAATGGTTT
GAAGACGGTG AACTCAACGC TTCGGCCAAT TGCCTGGACA AGCACATGGG CACGCCGGTG
GAGAATAAAA CAGCCGTCAT TTTTGAAGCC GACGACGGTG TCGTCACCAA GACCAGCTAC
AAGGAGTTGC TGGCCCGCGT CAGCCAGTTT GCCAACGCAC TCAAGGCCCA TGGCATCAAC
AAGGGCGACC GCGTCCTGAT CTACATGCCG ATGTCACTCG AAGGTGTGAT TGCCATGCAG
GCCTGCGCCC GCATTGGTGC CATCCACAGC GTGGTGTTTG GCGGCTTTTC GGCCAAGGCG
CTGCAAGAAC GCATCATGGA TGCCGGTGCG GTGGCCGTGG TCACGGCCAA CTACCAGAAG
CGCGGCGGCA AAGAGCTGCC CTTGAAATCG ATTGTGGACG AAGGTTTGGG TCTGGGCGGC
TGCGAGTCGA TCAAGACGGT CTTTGTGTAC CAGCGCGCCA CCACCGCCTG CAATATGGTG
GCCGGGCGCG ACGTCACGTT CACCGATGCA TTGGCCGGGC AAAGCACCGA ATGCGCGCCG
GTGGCGGTGG GTGCCGAGCA TCCCTTGTTC ATTCTTTTCA CCTCGGGTTC CACGGGCAAA
CCCAAGGGTG TGCAGCATTC CACCGGCGGC TTCTTGCTGT GGGCCAAGCT GACGATGGAC
TGGGTGTTTG ACCTGCAGCC GTCCGATGTG TTCTGGTGCA CCGCCGACAT CGGCTGGATC
ACCGGCCACT CCTACGTGGC CTATGGGCCG CTGGCAGCAG GCGCCACGCA AATCATATTT
GAAGGCATCC CGACCTACCC GAATGCCGGT CGCTTCTGGC AGATGATCGA GCGCCACAAG
TGCAGCATTT TTTACACCGC GCCGACTGCC ATCCGTGCGC TGATCAAGTC GGCCGAGTCC
GATGCAAAAG TTCACCCTGA TCGCTCGGAT CTGTCGAGCC TGCGCATCCT GGGCACGGTC
GGCGAACCGA TCAACCCCGA AGCCTGGATG TGGTACTACA AACACGTCGG CCGTGAGCGT
TGCCCGATTG TGGACACCTT CTGGCAGACC GAGTCCGGCG GCCACATGAT TTCGCCGCTA
CCCGGTGCCA CGCCACTGGT TCCGGGCAGC TGCACCTTGC CACTGCCGGG CATCATGGCG
GCCATCGTGG ACGAAGCGGG TCACGATGTG CCCAATGGAT CGGGCGGCTT GTTGGTCGTC
AAGCGCCCCT GGCCGTCGAT GATTCGCACC ATCTGGAATG ATCCGGAGCG CTTCAAGAAA
GGCTATTTCC CGGATGAGCT GGGTGGCACG GTTTATCTGG CGGGGGACGG CGCGGTGCGC
AGTGTCGATC GTGGTTACTT CCGCATCACC GGCCGCATCG ACGACGTGCT CAACGTCTCA
GGGCACCGCA TGGGCACGAT GGAAATCGAG TCGGCGCTGG TTGCCAAGAC CGATCTGGTG
GCCGAAGCTG CCGTGGTCGG GCGCCCGGAC GATATGACCG GTGAGGCGAT TTGCGCCTTT
GTGGTGCTCA AGCGTCCGGT GCCCACCGGT GACGAAGCCA AAGCCATTGC CAAGGAACTA
CGCGACTGGG TGGCCAAAGA AATTGGCCCG ATTGCCAAAC CCAAGGACAT CCGCTTTGGC
GAGAACCTGC CCAAGACCCG TTCCGGCAAG ATCATGCGCC GCCTGCTGCG CTCATTGGCC
AAGGGCGAGA CCATCACCCA GGACACCTCC ACGCTGGAGA ATCCGGCGAT TCTGGATCAG
TTGGGGCAGA CTTACTGA
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| Protein sequence | MSSPSTAVES TLVENRVFPP SEATVKAARI SGMDGYNALC AEAEKDFEGF WARLARENVV
WTKPFTKTLD ESNAPFYKWF EDGELNASAN CLDKHMGTPV ENKTAVIFEA DDGVVTKTSY
KELLARVSQF ANALKAHGIN KGDRVLIYMP MSLEGVIAMQ ACARIGAIHS VVFGGFSAKA
LQERIMDAGA VAVVTANYQK RGGKELPLKS IVDEGLGLGG CESIKTVFVY QRATTACNMV
AGRDVTFTDA LAGQSTECAP VAVGAEHPLF ILFTSGSTGK PKGVQHSTGG FLLWAKLTMD
WVFDLQPSDV FWCTADIGWI TGHSYVAYGP LAAGATQIIF EGIPTYPNAG RFWQMIERHK
CSIFYTAPTA IRALIKSAES DAKVHPDRSD LSSLRILGTV GEPINPEAWM WYYKHVGRER
CPIVDTFWQT ESGGHMISPL PGATPLVPGS CTLPLPGIMA AIVDEAGHDV PNGSGGLLVV
KRPWPSMIRT IWNDPERFKK GYFPDELGGT VYLAGDGAVR SVDRGYFRIT GRIDDVLNVS
GHRMGTMEIE SALVAKTDLV AEAAVVGRPD DMTGEAICAF VVLKRPVPTG DEAKAIAKEL
RDWVAKEIGP IAKPKDIRFG ENLPKTRSGK IMRRLLRSLA KGETITQDTS TLENPAILDQ
LGQTY
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