Gene Rfer_2575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_2575 
Symbol 
ID3960905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp2835609 
End bp2836310 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID637917394 
ProductPirin-like 
Protein accessionYP_523823 
Protein GI89901352 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.226519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACAG TTCGCAAATC GCAGGAACGC GGCTTCGCCG ACCACGGCTG GCTCAAGTCC 
TTTCACAGTT TCTCTTTTGC CGGTTATTAC GATCCGCAGC ATATGGGCTG GGGCAATTTG
CGCGTGATCA ATGAAGACTG GATCGCGGCC GGCAAGGGCT TTGGCACCCA TGGCCATCGC
GACATGGAGA TCGTCACCTA CGTGCTGAGC GGCTCGCTGG CGCACCAGGA CAGCATGGGC
AACATCAAGG CGATCCCGCC CGGCGACGTG CAGCGCATGA GCGCCGGCAC CGGCGTGCAG
CACAGCGAGT TCAACCACGC GCCCAACGCC ACCACCCATT TGCTGCAAAT CTGGATTGAG
CCCAATGTGA CGGGTGTGGT GCCCAGCTAC GAGCAAAAGA CCTTTCTTGA TACCGAAAAG
CAGGGCCAGT TGCGCCTGGT CGCGTCGCCC GACGGTGCCC AGGGCTCGGT CACGATTCAT
GCCGATGCGC GCCTGTACGC GGGCTTGTTG GACGGCAACC AGTCCGCCCA ACTCACGCTG
GCGCCGAATC GAAAGAGTTA CGTGCATTTG GTGCGCGGTG AACTCGACGT CAATGGCCAA
TGCTTGACTG CCGGTGACGC GGCCTTGCTG GCCGACGAAA TCCAGGTCAA TCTGACACAC
GGCAAAGACG CTGAAGTGCT GGTTTTTGAC CTGATTGCCT GA
 
Protein sequence
MLTVRKSQER GFADHGWLKS FHSFSFAGYY DPQHMGWGNL RVINEDWIAA GKGFGTHGHR 
DMEIVTYVLS GSLAHQDSMG NIKAIPPGDV QRMSAGTGVQ HSEFNHAPNA TTHLLQIWIE
PNVTGVVPSY EQKTFLDTEK QGQLRLVASP DGAQGSVTIH ADARLYAGLL DGNQSAQLTL
APNRKSYVHL VRGELDVNGQ CLTAGDAALL ADEIQVNLTH GKDAEVLVFD LIA