Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2575 |
Symbol | |
ID | 3960905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2835609 |
End bp | 2836310 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917394 |
Product | Pirin-like |
Protein accession | YP_523823 |
Protein GI | 89901352 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.226519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACAG TTCGCAAATC GCAGGAACGC GGCTTCGCCG ACCACGGCTG GCTCAAGTCC TTTCACAGTT TCTCTTTTGC CGGTTATTAC GATCCGCAGC ATATGGGCTG GGGCAATTTG CGCGTGATCA ATGAAGACTG GATCGCGGCC GGCAAGGGCT TTGGCACCCA TGGCCATCGC GACATGGAGA TCGTCACCTA CGTGCTGAGC GGCTCGCTGG CGCACCAGGA CAGCATGGGC AACATCAAGG CGATCCCGCC CGGCGACGTG CAGCGCATGA GCGCCGGCAC CGGCGTGCAG CACAGCGAGT TCAACCACGC GCCCAACGCC ACCACCCATT TGCTGCAAAT CTGGATTGAG CCCAATGTGA CGGGTGTGGT GCCCAGCTAC GAGCAAAAGA CCTTTCTTGA TACCGAAAAG CAGGGCCAGT TGCGCCTGGT CGCGTCGCCC GACGGTGCCC AGGGCTCGGT CACGATTCAT GCCGATGCGC GCCTGTACGC GGGCTTGTTG GACGGCAACC AGTCCGCCCA ACTCACGCTG GCGCCGAATC GAAAGAGTTA CGTGCATTTG GTGCGCGGTG AACTCGACGT CAATGGCCAA TGCTTGACTG CCGGTGACGC GGCCTTGCTG GCCGACGAAA TCCAGGTCAA TCTGACACAC GGCAAAGACG CTGAAGTGCT GGTTTTTGAC CTGATTGCCT GA
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Protein sequence | MLTVRKSQER GFADHGWLKS FHSFSFAGYY DPQHMGWGNL RVINEDWIAA GKGFGTHGHR DMEIVTYVLS GSLAHQDSMG NIKAIPPGDV QRMSAGTGVQ HSEFNHAPNA TTHLLQIWIE PNVTGVVPSY EQKTFLDTEK QGQLRLVASP DGAQGSVTIH ADARLYAGLL DGNQSAQLTL APNRKSYVHL VRGELDVNGQ CLTAGDAALL ADEIQVNLTH GKDAEVLVFD LIA
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