| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2562 |
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| Symbol | |
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| ID | 3960892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2823570 |
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| End bp | 2825294 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637917381 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_523810 |
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| Protein GI | 89901339 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGG ATATTCCGGA AATTCTGGGG CAATCGGCCC AGCAATTTCA ACAGGCTTTG
GGTGAGGGTT GGCGTAACGC TTTCCAGTCG TTCCAGAACA TGGATTTGGG TCAGGCAGCA
AAGGGGTTGA TCCCGCCGGG CAGCCCGCCG CCCAAGATCA GTTTTGCCCC CGAGAAACTG
CAGGCGCTGC AACAGCAGTT CCTCCAGGAG GCGGCGACAC TCTGGGGTCA AAGCCTGCAC
GGCACCACAC AGCCCAAGGA TCGGCGCTTT GCCGACAAGG CCTGGGAAAA CAATCCGATG
GCGGCTTTTT CGGCCGCGGC TTACCTGCTC AACACCCGCA CCTTGATGGG ACTGGCCGAT
GCCGTGCAGG CCGATGCCAA GACCCGGGCC CGCATCCGCT TCGCGGTTGA ACAGTTGACC
GCAGCGGCCG CGCCGAGCAA CTTTTTGGCC TTCAATGCCG AGGCGCAGCA AAAGGCGATC
GAGTCCCAGG GCGAGAGTAT TGCCAAGGGC GTGACCAACC TGATCCATGA CCTGCGCCAG
GGCCATGTGT CCATGACCGA TGAAAGCATT TTCGAAGTCG GTAAAAACGT TGCGACCACC
GAGGGTGCGG TGGTGTTCGA GAACGACTTG TTCCAGCTGA TCGAGTACAA GCCGCTGACT
GACAAGGTGT ATGAAAAGCC CTTCCTGCTG GTGCCGCCCT GCATCAACAA GTTTTATATC
CTGGACCTGC AGCCGGATAA CTCGCTGATC CGCTACGCCG TGGCGCAGGG CCACCGGACC
TTTGTGGTGA GTTGGCGCAA CCCGGACGCC TCGCTGGCGC ACAAAACCTG GGATGACTAC
ATTGACGATG CGGTGATCAA AGCCATCACG GTCACGCAGG ACATCACCGG GGCCAAGAGC
ATCAACGCGC TGGGCTTTTG TGTTGGCGGC ACCATGCTGG GCACGGCACT GGCGGTGCTG
GCGGCGCGCG GCGAAAAGCC GGTTGCCAGT GCCACCTTTC TCACGTCCTT GCTCGATTTC
AGCGACACCG GCATCCTGGA TGTCTTTATC GACGAGGCGT TTGTCAAATA CCGGGAACAG
GAGATGGGCC AGGGCGGCTT GATGAAAGGG AAAGACCTGT CAAGCACCTT CAGTTTCTTG
CGCCCCAACG ACCTGGTGTG GAACTACGTG GTGGGCAACT ACCTCAAGGG TGAAACCCCG
CCGCCTTTTG ACCTGCTGTA CTGGAACAGT GATTCCACCA ATCTGCCGGG GCCGTACTAC
GCCTGGTACT TGCGCAATAC CTACCTGGAA AACAGGCTGG TCAAGCCCGG CCAAGCGGTG
GTCTGCGGTG AAAAGGTCGA TCTGGGACTG GTGGACATGC CGGTCTATAT TTATGGCTCG
CGCGAAGACC ATATCGTGCC GATTGGCGGC GCCTACGCAT CGACTCAGGT TTTGCCCGGT
AAAAAGCGCT TCGTGATGGG GGCCTCCGGC CACATTGCGG GCGTGATCAA CCCACCGGCC
AAGAACAAAC GCAGCCACTG GTTACGCTCT GACGGCAAGT TGCCCCAAGC GCACGCCGAA
TGGCTGGCTG GCGCCACTGA GCAAGCGGGC AGTTGGTGGA CGGATTGGTC TCAGTGGTTA
GTGAGCCATG CGGGCAAGCA GATTCCCGCG CCCAAGACAT ATGGCAAAGG CAAATACAGG
GCCATCGAGG CGGCCCCCGG CCGCTACGTC AAGGCCAAGG CATAA
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| Protein sequence | MTQDIPEILG QSAQQFQQAL GEGWRNAFQS FQNMDLGQAA KGLIPPGSPP PKISFAPEKL
QALQQQFLQE AATLWGQSLH GTTQPKDRRF ADKAWENNPM AAFSAAAYLL NTRTLMGLAD
AVQADAKTRA RIRFAVEQLT AAAAPSNFLA FNAEAQQKAI ESQGESIAKG VTNLIHDLRQ
GHVSMTDESI FEVGKNVATT EGAVVFENDL FQLIEYKPLT DKVYEKPFLL VPPCINKFYI
LDLQPDNSLI RYAVAQGHRT FVVSWRNPDA SLAHKTWDDY IDDAVIKAIT VTQDITGAKS
INALGFCVGG TMLGTALAVL AARGEKPVAS ATFLTSLLDF SDTGILDVFI DEAFVKYREQ
EMGQGGLMKG KDLSSTFSFL RPNDLVWNYV VGNYLKGETP PPFDLLYWNS DSTNLPGPYY
AWYLRNTYLE NRLVKPGQAV VCGEKVDLGL VDMPVYIYGS REDHIVPIGG AYASTQVLPG
KKRFVMGASG HIAGVINPPA KNKRSHWLRS DGKLPQAHAE WLAGATEQAG SWWTDWSQWL
VSHAGKQIPA PKTYGKGKYR AIEAAPGRYV KAKA
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