| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2560 |
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| Symbol | fabG |
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| ID | 3960890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2821467 |
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| End bp | 2822204 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637917379 |
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| Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_523808 |
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| Protein GI | 89901337 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.562191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAAA AAGTAGCCTA TGTCACGGGG GGCATGGGAG GCATCGGTAC CGCCATTTGC
CAACGTTTGC ACAAAGAGGG GTTCAAGGTC ATTGCGGGCT GCGGCCCGAC ACGTGACCAT
GCGAAATGGC TGGCCGAACA GCAGGCACTG GGCTTTACGT TCCATGCCTC CGTCGGCAAC
GTCGGCAATT GGGTTTCCAC CGTCGAAGCT TTTACCAAGG CCAAGGCTGA GCACGGCAGC
ATTGATGTGC TGGTGAACAA CGCCGGCATC ACGCGCGACC GCATGTTCGT CAAGATGACA
CGTGATGACT GGGATGCGGT GATTGAAACC AACTTGAATT CCATGTTCAA CGTCACCAAG
CAAGTGGTGG CCGACATGGT GGAAAAAGGC TGGGGCCGCA TCATCAATAT TTCGTCCGTC
AATGGGGCCA AGGGCCAGGC CGGCCAGACC AACTATTCGG CCGCCAAGGC CGGCATGCAC
GGCTTCACCA TGGCGCTGGC GCAAGAGCTG GCCACCAAGG GCGTCACAGT CAATACCGTG
AGCCCGGGCT ACATCGGGAC CGACATGGTC AAGGCCATCC GTCAGGATGT GCTCGACAAG
ATCATTGCCA CGGTACCGGT CAAGCGTCTG GGCGAGCCGA GCGAAATTGC CTCCATCATT
GCCTGGATTG CCTCCGACGA GGGTGGCTAC TCAACCGGCG CCGATTTCTC GGTGAACGGC
GGTCTGCACA TGGGCTGA
|
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| Protein sequence | MSQKVAYVTG GMGGIGTAIC QRLHKEGFKV IAGCGPTRDH AKWLAEQQAL GFTFHASVGN
VGNWVSTVEA FTKAKAEHGS IDVLVNNAGI TRDRMFVKMT RDDWDAVIET NLNSMFNVTK
QVVADMVEKG WGRIINISSV NGAKGQAGQT NYSAAKAGMH GFTMALAQEL ATKGVTVNTV
SPGYIGTDMV KAIRQDVLDK IIATVPVKRL GEPSEIASII AWIASDEGGY STGADFSVNG
GLHMG
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