Gene Rfer_2546 details

Gene Information

• Locus tag: Rfer_2546
• Symbol: smpB
• ID: 3960266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: +
• Start bp: 2807104
• End bp: 2807577
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637917365
• Product: SsrA-binding protein
• Protein accession: YP_523794
• Protein GI: 89901323
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0662204
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAGA AACCTGACAC CGCCTCCCGC ATTGCCGACA ACAAGAAGGC GGCCTACAAC 
TATTTTTTTG AAGAACGTTT TGAAGCCGGC CTGGTGCTCG AAGGCTGGGA GGTCAAGTCG 
CTGCGCGAAG GCAAGGTCCA GATCACCGAC GGTTACGTGG TCATTCGCAA CGGTGAGTTG 
TTTGTCATCG GTCTGCAGAT CAATCCGCTG GGCACCGCCT CGACCCATAT CAGCCCCGAC 
AAGCAGCGCA CCAAGAAACT CCTGATGCAC AAGGAAGAAA TCAAGCGTTT GATTGGCAAG 
GTCGAGCAAA AAGGTTACAC CCTGGTGCCG TTGAACCTGC ATTGGAAAGC CGGCAAGATC 
AAATGCGAAA TTGCGCTGGC CAAGGGCAAG GCCGAGCACG ACAAGCGCGA CACCATCAAG 
GACCGTGAAG GCAAACGTGA GGTGGAGCGG GCGATGAAGA CCAATCACCG GTAA 

 

Protein sequence

MAKKPDTASR IADNKKAAYN YFFEERFEAG LVLEGWEVKS LREGKVQITD GYVVIRNGEL 
FVIGLQINPL GTASTHISPD KQRTKKLLMH KEEIKRLIGK VEQKGYTLVP LNLHWKAGKI 
KCEIALAKGK AEHDKRDTIK DREGKREVER AMKTNHR