| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2545 |
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| Symbol | |
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| ID | 3960265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2805990 |
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| End bp | 2807060 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917364 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_523793 |
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| Protein GI | 89901322 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.336249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCAAGA CAGCGCACAA GACGAGGCCC GCGAAGCGCG CCATCCGTCA CCGTCGCCTC
GCCCGCCACC AGGCGGCCAG CAGGCAGCCC GCGCTGCCCG GACCCATCTA CGCGCAGCGC
ACGGACGCCA TGCTGGCCGC CGATGACATC GCAGCACGCC GCGACCTGCC GCCTGACTGG
GTGCGCCAGG CCATCGGCCA GGCCCACTAC TTGCCGCAAG TGGCCAGATT CATCCAGCCA
CCGCCGCCGG GTACACCCAA AAACTGGCAG GTTTACCGCA GCCGCTTCAT CGACCCGGTG
CGCATCAGGG CCGGGGTCCA GTTCTGGCAA GACAACCAGC AGATGCTGAC GCGTGCGCAA
GAGCAGACCG GTGTGCCCGC CGAGATCATC GTCGGCATCC TCGGGGTGGA GACCATCTAT
GGCCAGCAGA TGGGCAGCTT TCGGGTCATC GACGCTTTGA CGACACTGGC TTTTGATTTT
CCCGCCAGCC ATCCCCGCGC GGCGGCCCGC AGCGAGTTCT TCAAGGCCGA GCTGGAACAG
TTCTTGAGCC TGACCCACCG CACCGGCATG GACCCTTTGA TGCCCCTGGG CAGCTTTGCC
GGGGCCATGG GCATGACGCA ATTCATGCCG TCGAGCTGGG TGAAGTACGC GATTGACTTT
GACGGCGACG ACCGGGTGGA CCTGTTCAAC AGCGCGGCCG ACGCGATTGG TTCGGTCGCC
AACTATTTCA AGGCCTTCAA CTGGCAAGCC GGCCTGCCGA CCCATTACGC TGTGCGTTTT
GACAGCGCCA CTTTGAGCCT GCCGGCGCTG CTGGCACCCG ACATCCTGCC CACCTTCAGC
GTCGAAAGCT TTGTGGCCCA CGGCGCCGTG CTTGAAGGCG CCGCATTGCA GCATCCGGGG
AAGCTGGCAC TGGTGGAGTT GCAAAATGGC GATGCGCCCC CCAGCTATGT GGCCGGCACC
GAAAATTTCT ATGCCATCAC GCGCTACAAC TGGAGCAGCT ACTATGCCAT GGCCGTGATT
GAGCTGGGCC AGGAAGTGGC GCAAGAAATG GCACGCGCCC GCAATCCCTA G
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| Protein sequence | MVKTAHKTRP AKRAIRHRRL ARHQAASRQP ALPGPIYAQR TDAMLAADDI AARRDLPPDW
VRQAIGQAHY LPQVARFIQP PPPGTPKNWQ VYRSRFIDPV RIRAGVQFWQ DNQQMLTRAQ
EQTGVPAEII VGILGVETIY GQQMGSFRVI DALTTLAFDF PASHPRAAAR SEFFKAELEQ
FLSLTHRTGM DPLMPLGSFA GAMGMTQFMP SSWVKYAIDF DGDDRVDLFN SAADAIGSVA
NYFKAFNWQA GLPTHYAVRF DSATLSLPAL LAPDILPTFS VESFVAHGAV LEGAALQHPG
KLALVELQNG DAPPSYVAGT ENFYAITRYN WSSYYAMAVI ELGQEVAQEM ARARNP
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