| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2544 |
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| Symbol | |
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| ID | 3960264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2804560 |
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| End bp | 2805756 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917363 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_523792 |
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| Protein GI | 89901321 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.871243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTAA CTTCGATCAA GCGCTGGCTG GCACCGCCCG TTTTTGAAGG CGCGGAGGAA
AAGACGCGCC AGGCGAGTTT GATCAACATG GTCTGCATCA CCTCCCTGGC ATTTACGCTG
GCAGTCATGG TGGGTGCTTT GATGGGCGGG AAAACCCCGG TCAGCACCCT GATCATCGAC
TTGGTGGCGT GCGCAGTGAC CCTGCAGTTT CGCCACTGGC TGCGCAGCGG CAGGGTGGTG
CTGGCGCGGT TCGGAATGGT CATCTTCGGC CTTGTCTTCA TCACCGCGGT CACAGCCGAC
ATAGGCACCA TTCGCACGCC GACGGCCGCC ATCTTGCTGT TTTGGGTGCT CATGACAGGC
TTGATCTTTG ACCGGCGCGG CATTGTGATC GGCACCATCG CCGCCTCGAT GGCGGTGCTG
GGCTTGATCG TGGCCGAGAA TGCCGGGTGG CTGAGGCCGC CTTTTTACGA CGTTGGCGTG
ACGCAGTGGG TCACCTTCAC CGCCCTGTTC GGATTCACCA GCGGTCTCAC TTATTACATC
AACCAAGGTA CAAAAAGCGC GCTGGCGCTT GCCAGGAAGG AAATCGAGCA ACGCAAGCAG
GCTGAACAGT CACTCAAAGC CGCCAATGAG GAACTGCATT TGCGTGTGTT TGAAGTGCAA
AGACTGCAGG TCGAATTGCA CGAACAGGCG ATTCATGACC CGCTGACGGG TCTTTATAAC
CGCCGCTATC TGAGCGATGC GCTGGCGCGC GAAATCATAC AAGCCAAGCG GGCGAACAGT
AGCCTCACCT TTGTCATGGC AGACATCGAT CATTTCAAGT TTGTCAACGA CAGCTACGGG
CATCTGGCCG GCGACGAAGT CCTGGTGCAG GTTGCCAGTC TCCTGAAAAA ACATGCCCGC
GGTTCCGACA TTGCGTGCCG CTACGGTGGT GAAGAATTCC TGCTGGTGTT TCCCGGAACA
AGCCTGGAAC TTGCCCACAA GCGGGCAGAA GAAATCCAAC AAAATTGTGC TGCGCTGAGC
ATCCAGCATG AAGGAAAAAA TATTGCTGTG ATGCTGTCAT TTGGCGTGGC GGCCTACCCC
GATCATGGGC AGCAATGGGA ACAAATCATC GTCAAGGCCG ACAAGGCTTT ATACCAATCC
AAATGCAACG GCCGCAATCA AGTCACCATA TTCAGGGATG AGGAATTCCC CACTTGA
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| Protein sequence | MLVTSIKRWL APPVFEGAEE KTRQASLINM VCITSLAFTL AVMVGALMGG KTPVSTLIID
LVACAVTLQF RHWLRSGRVV LARFGMVIFG LVFITAVTAD IGTIRTPTAA ILLFWVLMTG
LIFDRRGIVI GTIAASMAVL GLIVAENAGW LRPPFYDVGV TQWVTFTALF GFTSGLTYYI
NQGTKSALAL ARKEIEQRKQ AEQSLKAANE ELHLRVFEVQ RLQVELHEQA IHDPLTGLYN
RRYLSDALAR EIIQAKRANS SLTFVMADID HFKFVNDSYG HLAGDEVLVQ VASLLKKHAR
GSDIACRYGG EEFLLVFPGT SLELAHKRAE EIQQNCAALS IQHEGKNIAV MLSFGVAAYP
DHGQQWEQII VKADKALYQS KCNGRNQVTI FRDEEFPT
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