| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2528 |
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| Symbol | |
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| ID | 3961884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2787232 |
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| End bp | 2788179 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917347 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_523776 |
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| Protein GI | 89901305 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGCT ATTACACCCA TCCCGATTGC CGCAAACATG AAATGGGGCC GGGCCACCCC
GAGTGCCCGG AGCGGCTTGA TGCCATCGAA GACCGGCTGT TGATCACCGG CCTGGGGCTG
GCGCTGGAGC GGCGCGAGGC GCCTGCGGCG TCGCTGACCG ACATCGAGCT GGCGCACAGC
CGCACGCATG TGGCGGCACT GCGCGGCTTG AGCGATGTGC TGAAAGAAGA CATTCTGGCC
GGTGGCCCGC CCTATGCCCA GGTGGACCCC GACACCTCCA TCAACGTCTA CACCTGGGAC
GCCGCCCTGC ACGCGGCCGG CGCGGCCTTG GCCGCTACCG ACGCGGTGAT TGCGGGCGAC
TTTGAAAACG CGTTTTGCGC CATTCGCCCG CCCGGCCACC ATGCTTGCCG CGACCAGGCC
ATGGGCTTCT GCTTTTTCAA CAACGTGGCG CTGGCCGCCA AGTACGCGCT CGAGCGCCAT
GGCTTGAAGC GGGTCGCCAT TGTTGATTTT GATGTGCACC ACGGCAACGG CACCGAAGAC
ATCGTGGCGG GCGACAAGCG TATTTTGATG GTGAGCTTTT ACCAGTATCC GTTTTATCCG
CTCGATCACG TTCACTCCAG TGCTGCCAAC CTGGTCAATC TGCCGGTACC GGCCTACACC
AAGGGCATGG AGATCAGGGA GCTGATCGAA AGCGCCTGGA TGCCGCGGCT GGAGGCTTTC
CGGCCCGAGA TGATTTTCAT CAGCGCCGGC TTCGACTCGC ACCGGGAGGA CGACATGGGC
CAGTTGGGCC TGGTCGAGCA GGACTACATC TGGATCACGC ATCGCATCAA AGACGTGGCG
CGGCGCCACG GCAAGGGACG CATTGTGTCG TGTCTGGAAG GTGGCTATTC CTTGAGCGCG
CTCGGTCGCA GTGTGGAGGG ACATATTCGG GTGCTGGCCG ATGTTTGA
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| Protein sequence | MTGYYTHPDC RKHEMGPGHP ECPERLDAIE DRLLITGLGL ALERREAPAA SLTDIELAHS
RTHVAALRGL SDVLKEDILA GGPPYAQVDP DTSINVYTWD AALHAAGAAL AATDAVIAGD
FENAFCAIRP PGHHACRDQA MGFCFFNNVA LAAKYALERH GLKRVAIVDF DVHHGNGTED
IVAGDKRILM VSFYQYPFYP LDHVHSSAAN LVNLPVPAYT KGMEIRELIE SAWMPRLEAF
RPEMIFISAG FDSHREDDMG QLGLVEQDYI WITHRIKDVA RRHGKGRIVS CLEGGYSLSA
LGRSVEGHIR VLADV
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