| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2524 |
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| Symbol | |
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| ID | 3961880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2783632 |
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| End bp | 2784585 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637917343 |
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| Product | peptidase C39, bacteriocin processing |
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| Protein accession | YP_523772 |
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| Protein GI | 89901301 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.497952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGC AACTCATTGG TCTGCGAGCC CCCGTCTTGA CGGGGGTTTT TGTTTGCGCG
GTGCTGCTTC TGGGTGGCTG CGCCACACCG CAGGTGGCGA TGCTGGATGC ACGCTGGCCA
ACTGAACTTC CCGCACAGGT AGAACTTGCC GATGTTCCGT TTTTTCCGCA AGAAGACTAT
GAATGTGGTC CTGCCGCGCT GGCGATGGTG GCCACTGCTG CGGGCGTCGA TGTGACGCCG
GATGCGCTTG TGGATCAGGT TTACCTGCCG GGTCGCAAAG GCTCGTTGCA GCCCGAAATG
CTGGCCGCCA CGCGTCGGCA GGGCTTGCTG GCTTATCCGT TGAAGCCGAG GGTGGAAGAC
ATACTGCGCG AAGTGGCGGC AGGCCACCCG GTGCTGGTGT TCCAGAATTT GGCGTTCTCA
ATCTACCCGG TGTGGCACTA CGCCGTGGTG ATGGGCTTTG ACCGCGAACG CCATGTGCTG
CTGCTGCATT CCGGGCGCAC GGCGCGCATG GAGATTTCAA TGTTTGCCTT TGAGCGCACC
TGGGCGCGCG GGCAGTACTG GGCCATGCTG GCGCTCAAGC CCGGGCAACT GCCCGCCACC
GCCGAGCCCC AGGCTTACAG CGCCGCAGCG GCCACGCTGG AACGCACGGA TGCACGCGGC
GCGCAGCAAG CTTTTGCGGC CGCACTGCAA CGCTGGCCGG ACGACCGTGC GGCCTTGCTG
GGCGCGGGCA ACACCGCTTA TGCGTTGGGC CAGCGTGACG CAGCGGCCAA GGCCTACCGC
CAGGCGGTTC TCAAGCACCC CGATTTTGCC GACGGCTGGA ACAATCTGGC GCAAGTGCTG
CTGGAGCTCG ATCGTCGCCA GGAGGCCAGT CAAGCGATCG CGCGCGCGGT GGCCTTGGGT
GGTGAGCGCC TGCCAGCGTA TTTGGCCTTG CAGGCAAAAA TTTATAACAA ATAG
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| Protein sequence | MIKQLIGLRA PVLTGVFVCA VLLLGGCATP QVAMLDARWP TELPAQVELA DVPFFPQEDY
ECGPAALAMV ATAAGVDVTP DALVDQVYLP GRKGSLQPEM LAATRRQGLL AYPLKPRVED
ILREVAAGHP VLVFQNLAFS IYPVWHYAVV MGFDRERHVL LLHSGRTARM EISMFAFERT
WARGQYWAML ALKPGQLPAT AEPQAYSAAA ATLERTDARG AQQAFAAALQ RWPDDRAALL
GAGNTAYALG QRDAAAKAYR QAVLKHPDFA DGWNNLAQVL LELDRRQEAS QAIARAVALG
GERLPAYLAL QAKIYNK
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